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cn_combo_scaffold_7845_10

Organism: CN-SCN_Pseudonocardia_86x

partial RP 15 / 55 MC: 1 BSCG 14 / 51 MC: 2 ASCG 7 / 38 MC: 1
Location: comp(6421..7041)

Top 3 Functional Annotations

Value Algorithm Source
Regulatory protein TetR n=1 Tax=Frankia sp. CN3 RepID=G6H5H8_9ACTO similarity UNIREF
DB: UNIREF100
  • Identity: 65.0
  • Coverage: 200.0
  • Bit_score: 251
  • Evalue 8.50e-64
TetR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 65.1
  • Coverage: 186.0
  • Bit_score: 235
  • Evalue 1.00e-59
Regulatory protein TetR {ECO:0000313|EMBL:AEA22497.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (st similarity UNIPROT
DB: UniProtKB
  • Identity: 65.1
  • Coverage: 186.0
  • Bit_score: 235
  • Evalue 5.20e-59

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Taxonomy

Pseudonocardia dioxanivorans → Pseudonocardia → Pseudonocardiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 621
ATGTCAGCCTCTGTCATCACTAGACTCGAACGCATGGGGCGATGGGAACCGGACGCGCGCGGACGCATGGTCGTCGCCGCCATGGAGCTCTTCGCCGAGCGCGGCTTCGACGCCACCACCGCCGGCGAGATCGCCGAACGCGCCGGCGTCACCGAGCGCACCTTCTTCCGGCACTTCCCCGACAAGCGTGAGGTGCTCTTCGACAGCACCCACGCGATGGACCGGCTGACCGTCGACGCGATCGCCGCCGCACCGGACGGCCTCGGCCCGCTCGAGGTCGCCCTCGTCGGGATGACGGCCGGCGCCGGCCTGCTCGACGACCGGCACGACCACGCCGCCCGCCGTGCCACGATCATCGAGTCGGAGCCGAGCCTGCGGGAGCGCGAGCTGCTCAAGCTCGCCGGGCTCACCGAGGCGGCCGCCGATGCGCTGCGCCGCCGGGGGGTCGCCGATCCCGCGGCCGGGCTGGCCGCGCACACCGCCGTGACGGTCTTCCACCTGGCGTTCGTCCGCTGGGTCGCCGACGACGCCCCGCCCCCGATCGGCGAGGTCATGGCCGGGACCGCGGCCGCGCTCCGCGCCCTGACCGCAGCCGCACCACGAGCAGGGAGACACGCATGA
PROTEIN sequence
Length: 207
MSASVITRLERMGRWEPDARGRMVVAAMELFAERGFDATTAGEIAERAGVTERTFFRHFPDKREVLFDSTHAMDRLTVDAIAAAPDGLGPLEVALVGMTAGAGLLDDRHDHAARRATIIESEPSLRERELLKLAGLTEAAADALRRRGVADPAAGLAAHTAVTVFHLAFVRWVADDAPPPIGEVMAGTAAALRALTAAAPRAGRHA*