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cn_combo_scaffold_2024_10

Organism: CN-SCN_Pseudonocardia_86x

partial RP 15 / 55 MC: 1 BSCG 14 / 51 MC: 2 ASCG 7 / 38 MC: 1
Location: 10655..11332

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, HxlR family n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CIV9_PSEUX similarity UNIREF
DB: UNIREF100
  • Identity: 84.9
  • Coverage: 225.0
  • Bit_score: 403
  • Evalue 1.10e-109
HxlR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 84.4
  • Coverage: 225.0
  • Bit_score: 402
  • Evalue 9.20e-110
  • rbh
Transcriptional regulator, HxlR family {ECO:0000313|EMBL:AEA22938.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia di similarity UNIPROT
DB: UniProtKB
  • Identity: 84.4
  • Coverage: 225.0
  • Bit_score: 402
  • Evalue 4.60e-109

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Taxonomy

Pseudonocardia dioxanivorans → Pseudonocardia → Pseudonocardiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 678
GTGTCCAGATACGGGCAGTACTGTCCGATCACCAGGTCGCTGGAGGTTCTCGGCGACCGGTGGACGCTGCTCGTGATCCGCGACCTGCTCGTCGGCGCCACCCGGTTCAACGAACTGGCCCGTGGGCTGCCGGGGATGTCGCGCGGCCTGCTGTCCAAGCGGCTCGACCAGCTCCAGCGGCACGGACTCGTCGTCCACGCCGACGGCGCCTACCTGCCCACACCCGCCTGCGAGGACCTGCGGCCCGTCGTGTTCGGGCTGGCCGAGTGGGGTGCCCGCTGGGCGTTCGGAGAGCCGCGGGCCGACGAGCTCGACCCGATGGTGCTGATGTGGTGGATCCGCGCGGGCATCGACCCAGCACCGTTCGACGGGCGGCGCGCGGTGCTGCACGTCGACATGCCCGACGCGCGCCGACGCCGGTTCTGGTTTGTCGTCGAGCCGCAGGACGTCTCGCTGTGCCTGACCGACCCCGGGCACGACGTCGACGTGACGCTGCGGTCGTCGCTCGGCGTGCTCTACCAGATCTGGGAGGGGCGGATCGACCTGTCGAGCGCCGCCCGATCCGGGCTGGTCGACCTCGACGGGTCACGCGACGCGGTGAGCCGGGTCCGGCGGGCGCTGCGGCTCAGCCCGGTCGTCCCCTACGTGAGAGCGGCGGCACGAGCCACGGCGACCTGA
PROTEIN sequence
Length: 226
VSRYGQYCPITRSLEVLGDRWTLLVIRDLLVGATRFNELARGLPGMSRGLLSKRLDQLQRHGLVVHADGAYLPTPACEDLRPVVFGLAEWGARWAFGEPRADELDPMVLMWWIRAGIDPAPFDGRRAVLHVDMPDARRRRFWFVVEPQDVSLCLTDPGHDVDVTLRSSLGVLYQIWEGRIDLSSAARSGLVDLDGSRDAVSRVRRALRLSPVVPYVRAAARATAT*