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cn_combo_scaffold_2024_19

Organism: CN-SCN_Pseudonocardia_86x

partial RP 15 / 55 MC: 1 BSCG 14 / 51 MC: 2 ASCG 7 / 38 MC: 1
Location: 18175..19431

Top 3 Functional Annotations

Value Algorithm Source
Putative RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F7M6_CONWI similarity UNIREF
DB: UNIREF100
  • Identity: 72.6
  • Coverage: 402.0
  • Bit_score: 558
  • Evalue 5.10e-156
ECF subfamily RNA polymerase sigma-24 subunit similarity KEGG
DB: KEGG
  • Identity: 72.6
  • Coverage: 402.0
  • Bit_score: 558
  • Evalue 1.40e-156
Putative RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:ADB50888.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexib similarity UNIPROT
DB: UniProtKB
  • Identity: 72.6
  • Coverage: 402.0
  • Bit_score: 558
  • Evalue 7.10e-156

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Taxonomy

Conexibacter woesei → Conexibacter → Solirubrobacterales → Thermoleophilia → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1257
ATGACGGCTCCGGCCGAGATCGAGGCGGTCTTCGCGCGCGAGTACGGCCGCGCCGTCGCCGTTCTCATCCGCGTCCTCGGCGACATCGACCTCGCCGAGGACGCGGTCCAGGACGCGTTCACCGAGGCCGTCCGGCGCTGGCCCACCGACGGCCTGCCGCCTGCACCGGCCGGCTGGATCATCACCACGGCGCGGCGGCGCGCCGTCGACCGGCACCGTCGCGACACCGCCCGGGAGGCCCGCGACGTGGCCGCCGCGGTGATCGCGCCGATCGAGGAGGCCGCGGGAACCGAGGAGATCGAGGAGGACCCCGTGGGCGACGACCGGCTGCGGCTGATCTTCACGTGCTGCCACCCCGCACTGGACCAGGCCGCCCAGGTCGCGCTGACGTTGCGGCTGCTGGGCGGGCTCACGACCCCCGAGATCGCGCGCGCCTTCCTCGTCCCGGAACCGACGATGGCGCAGCGGCTGGTGCGCGCCAAGGCGAAGATCCGCGACGCGCACATTCCCTACCGCGTCCCGAGCGAGGCCGAGCTCCCCGACCGGCTGCGTGCGGTGCTCGCCGTCGTCTACCTGGTCTTCACCGAGGGCTACACGGCGACGTCGGGCGACGCGCTCGTCCGCGACGACCTGTGCGCCGAGGCGGTCCGACTGGGTCGTGTCCTCGCCGAGCTGATGCCCGACGAGCCGGAGGTGACGGGACTGCTGGCACTGATGCTGCTCGTCGAGTCCCGGCGACCGGCGCGCACCGGCCCGGCGGGCGAGCTCGTCCCGCTGCCCGCGCAGGACCGGTCGCGCTGGGACGGCGCGCTCGTCGCCGAAGGACAGGACCTGGTGCGGCGCTGCCTGCGCCGCAACGCCCCCGGGCCGTACCAGATCCAGGCGGCCATCAGCGCCGTCCACTCCGACGCCGCGTCCGTCGCCGCCACGGACTGGGGGCAGGTCGTCGCCCTCTATGACCAGTTGTCGACGATCGTGCCGAGCCCCGTCGTCGCCCTCAACCGTGCGGTCGCGGTGGCCGAGATCGACGGGCCGCGTGTCGCGCTGGGCGAGGTCGAGGCGATCGAGGGTCTCGACACCCACGTCCTGCACGCGGTCCGTGCCGACCTGCTCGAACGGCTCGGCCGCACCGACGAGGCCGCTGTCGCCTTCGACGCCGCGATCGCCCGCACGGACAACACCATCGAACGAGCGCATCTCACTGCGCGCCGCGACTCACTCACGCTGCGTCGCCCGGATGGACCTCGCCGCGGTTGA
PROTEIN sequence
Length: 419
MTAPAEIEAVFAREYGRAVAVLIRVLGDIDLAEDAVQDAFTEAVRRWPTDGLPPAPAGWIITTARRRAVDRHRRDTAREARDVAAAVIAPIEEAAGTEEIEEDPVGDDRLRLIFTCCHPALDQAAQVALTLRLLGGLTTPEIARAFLVPEPTMAQRLVRAKAKIRDAHIPYRVPSEAELPDRLRAVLAVVYLVFTEGYTATSGDALVRDDLCAEAVRLGRVLAELMPDEPEVTGLLALMLLVESRRPARTGPAGELVPLPAQDRSRWDGALVAEGQDLVRRCLRRNAPGPYQIQAAISAVHSDAASVAATDWGQVVALYDQLSTIVPSPVVALNRAVAVAEIDGPRVALGEVEAIEGLDTHVLHAVRADLLERLGRTDEAAVAFDAAIARTDNTIERAHLTARRDSLTLRRPDGPRRG*