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cn_combo_scaffold_2061_3

Organism: CN-SCN_Pseudonocardia_86x

partial RP 15 / 55 MC: 1 BSCG 14 / 51 MC: 2 ASCG 7 / 38 MC: 1
Location: comp(1379..2032)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, tetR family n=1 Tax=Saccharomonospora marina XMU15 RepID=H5X9F9_9PSEU similarity UNIREF
DB: UNIREF100
  • Identity: 56.0
  • Coverage: 216.0
  • Bit_score: 216
  • Evalue 3.20e-53
Transcriptional regulator, tetR family {ECO:0000313|EMBL:EHR50324.1}; TaxID=882083 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharomonospora.;" source="Saccharomonosp similarity UNIPROT
DB: UniProtKB
  • Identity: 56.0
  • Coverage: 216.0
  • Bit_score: 216
  • Evalue 4.50e-53
TetR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 56.3
  • Coverage: 213.0
  • Bit_score: 206
  • Evalue 7.20e-51

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Taxonomy

Saccharomonospora marina → Saccharomonospora → Pseudonocardiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 654
ATGAGCACCGAGGAGCCGCAGGGGCTGCGGGAACGTAAGAAGGTCGCAATGCGGGAGGCGCTGGCCGCGGCCGCGCTGCGGCTGGCCCAGCAGCACGGGGTGGCGGGCGTGCGCGTCGACGACATCGCCGACGCCGCCGGGGTCTCCCCCCGCACCTACAACAACTACTTCTCCAGCCGCGAGCAGGCGATCGTCTCCGCGCTCGCCGCGGAGCGCTCGTTGCGCATCGGCGCCGCGCTGGGGGCCCGGCCGGCGGGCGAACCGCTGTCGGTCGCGGTCGTCGAGGCCGTTGTCTCGCAGTACGACGAGGACCCCGGCACCGACGTGCTCGGGCTGCTCGCCGAGGCGCCGGCCCTGCATGCCGAGTACCTGGAGTCGATCTCGGCGTTGGAGGCGCCGCTCGCCGCGGCGGTGGCCGAGCGGGGGGGCACCCTCGACGACGAGACCGTCGCCGTGCTGGCCGCCGCCGTCGCCGCGGCCGCGAGGTCGGCCGCGAGCCGCTGGCTGACCGGCTTCCGCGACGCGGCGGCCACCGGCGCGTCGGGCCTGGTCGCCGTCACGACGGTCGACGGCGGCGCGCCCGGGTCGCTGGCCGAGGCGATCCGCGCCGCGCTCGCCGTCCTGTCCCCCGCGCTGGCGGCCCTCGACGGGTGA
PROTEIN sequence
Length: 218
MSTEEPQGLRERKKVAMREALAAAALRLAQQHGVAGVRVDDIADAAGVSPRTYNNYFSSREQAIVSALAAERSLRIGAALGARPAGEPLSVAVVEAVVSQYDEDPGTDVLGLLAEAPALHAEYLESISALEAPLAAAVAERGGTLDDETVAVLAAAVAAAARSAASRWLTGFRDAAATGASGLVAVTTVDGGAPGSLAEAIRAALAVLSPALAALDG*