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cn_combo_scaffold_2294_12

Organism: CN-SCN_Pseudonocardia_86x

partial RP 15 / 55 MC: 1 BSCG 14 / 51 MC: 2 ASCG 7 / 38 MC: 1
Location: comp(11652..13061)

Top 3 Functional Annotations

Value Algorithm Source
Cell envelope-related transcriptional attenuator n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CNE5_PSEUX similarity UNIREF
DB: UNIREF100
  • Identity: 78.2
  • Coverage: 472.0
  • Bit_score: 725
  • Evalue 4.60e-206
cell envelope-related transcriptional attenuator similarity KEGG
DB: KEGG
  • Identity: 78.4
  • Coverage: 472.0
  • Bit_score: 726
  • Evalue 5.80e-207
Cell envelope-related transcriptional attenuator {ECO:0000313|EMBL:AEA27169.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudon similarity UNIPROT
DB: UniProtKB
  • Identity: 78.4
  • Coverage: 472.0
  • Bit_score: 726
  • Evalue 2.90e-206

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Taxonomy

Pseudonocardia dioxanivorans → Pseudonocardia → Pseudonocardiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1410
GTGGTGGTCGCGCTGCTGTCGGCGACCGTTGTGGCGACCACCGGCTACGCCTGGTCGGCCTACGACCGGCTCGACGGCGGCATCGTCACCAGCGACGTCCTGAGCGGCGACCGCGCGGCCGACGGGGCGACGGACATCCTGCTGGTCGGCATCGACAGCCGCACCGACGCGCACGGCAACCCCCTGCCGCAGGCCGAGCTGAACGCCCTCGACGCCGGTCCCGACACCGGCACCGTCAACACCGACACGTTGATCCTCGTGCGCATCCCGGCGAGCGCGTCGGCGCCGGTCACGGCGATCTCGATCCCGCGCGACTCCTACGTCGACATCCCGGGCTACGGCACCCACAAGATCAACTCGGCGTACGCGCGGGCGGTCGCGACCGCGCACGACAAGCTGGCCGCCGCCGGCGTCACCGGGGCGGCGCTCGCGACGCAGGAGGACCAGGCCGGCCGCAAGGAGCTGATCCGGACCGTCGAGCAGCTCACCGGCGCCTCGGTCGACCACTACGCCGAGCTCAACCTCGTCGGGTTCGCCGACATGACCCAGGCCGTCGGCGGCGTCCAGGTGTGCCTGAACGCGCCCGCGCACGACACCTACTCCGGCGTCGACCTCCCCGCCGGGGAGCAGACCATCGAGGGCCCGCAGGCGCTCGCGTTCGTCCGGCAACGCCACGGGCTGCCGCGCGGGGACCTCGACCGCATCGTCCGCCAGCAGGCGTTCCTCGCCTCGCTGACCCACCAGGTGCTCTCCGCCGGCACGCTCGCCGACCCGTCGACGCTCACCGGGCTGATCGACGCCGTCGACCGTTACGTCGTCATCGACCCCGGTTGGGACCTGCTGACGTTCGCGTCCGGGATGCAGGGCCGCGCCGGCGGCGACATCAGGTTCCGCACCATCCCGACCGGGAGCCTCGCGCTGAAGACCCCCGCCGACGGCGACGCCGTGCAGGTCGACCCCGCCGCGGTGCGGGCATTCGTCGCCGGGGTGTCGGCGCCGCCCACGTCGTCGGCGTCGCCGTCGAACCCGCTCGCCGACGCCGGCGCAACGGTCGACGTCGAGAACGGGACCTCGCGCAGTGGCCTCGGCGCCGGGGTGGCGCGCTCGCTCGCCGCGGCGGGGATGGTCCTCGGCCCGGCCGTCACCACCGTCGCGACGACCCGTTCGATCGTGCGGGCCGGACCGGGTACCGACGCCACGGCCGCACAGGTCGCGTCGGACCTCGGCGGCCTGCCGCACGTCGACGACAGCGCCCTCCCCGCCGGGCACGTCGAGGTCGTCCTGGGCCACGACTTCAAGGGCCCGACCGGCCCGACCGCCGCGAGCACCACGACGACCACGACACCGCCGCCGCCCTCGACGCCGGCCGCCCCGCCGCTGACCGCCGACGGAGTGCCCTGCGTGAACTGA
PROTEIN sequence
Length: 470
VVVALLSATVVATTGYAWSAYDRLDGGIVTSDVLSGDRAADGATDILLVGIDSRTDAHGNPLPQAELNALDAGPDTGTVNTDTLILVRIPASASAPVTAISIPRDSYVDIPGYGTHKINSAYARAVATAHDKLAAAGVTGAALATQEDQAGRKELIRTVEQLTGASVDHYAELNLVGFADMTQAVGGVQVCLNAPAHDTYSGVDLPAGEQTIEGPQALAFVRQRHGLPRGDLDRIVRQQAFLASLTHQVLSAGTLADPSTLTGLIDAVDRYVVIDPGWDLLTFASGMQGRAGGDIRFRTIPTGSLALKTPADGDAVQVDPAAVRAFVAGVSAPPTSSASPSNPLADAGATVDVENGTSRSGLGAGVARSLAAAGMVLGPAVTTVATTRSIVRAGPGTDATAAQVASDLGGLPHVDDSALPAGHVEVVLGHDFKGPTGPTAASTTTTTTPPPPSTPAAPPLTADGVPCVN*