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cn_combo_scaffold_2294_16

Organism: CN-SCN_Pseudonocardia_86x

partial RP 15 / 55 MC: 1 BSCG 14 / 51 MC: 2 ASCG 7 / 38 MC: 1
Location: comp(17084..18400)

Top 3 Functional Annotations

Value Algorithm Source
MFS transporter n=1 Tax=Glaciibacter superstes RepID=UPI0003B65C7B similarity UNIREF
DB: UNIREF100
  • Identity: 72.8
  • Coverage: 427.0
  • Bit_score: 620
  • Evalue 1.50e-174
Arabinose efflux permease family protein {ECO:0000313|EMBL:KID30804.1}; TaxID=1515610 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Prauserella.;" source="Prauserella sp. A similarity UNIPROT
DB: UniProtKB
  • Identity: 82.0
  • Coverage: 422.0
  • Bit_score: 698
  • Evalue 6.00e-198
Major Facilitator Superfamily similarity KEGG
DB: KEGG
  • Identity: 48.2
  • Coverage: 434.0
  • Bit_score: 399
  • Evalue 8.90e-109

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Taxonomy

Prauserella sp. Am3 → Prauserella → Pseudonocardiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1317
GTGTCCGACCAGTCCGTCCCCGCTCCGACCCCTCGCCGGCAGTCCCGCCGCGCCGCGATCGGGAGCTTCGTCGGCACCACCCTCGAGTGGTACGACTTCTTCATCTACGGCACCACCGCCGCGCTGGTGTTCGGGCAGGTCTTCTTCCCGACGCAGGAGGGTGTCCTCGGCACCCTCGCCGCGTTCGCGACGTTCGCCGTCGGGTTCATCGCCCGGCCCTTCGGCAGCATCCTGTTCGGGCACTTCGGTGACCGCATCGGCCGCCGCAACGTCCTCATCGCGACGCTGCTGATCATGGGCGGCGCGACCGTCCTCATCGGACTCATCCCGTCCTACGCGACGATCGGCGTCTGGGCGCCGGTCCTGCTCGTCCTGTGCCGCATCGCCCAGGGTGTCGCCCTCGGCGGCGAGTGGGGCGGCGCCGCGCTGCTGTCGGTGGAGAACGCGCCCGCCCGCAGGCGCGGCTTCTTCGGCTCGTCGACGCAGGTCGGCTCGCCGGCCGGGCTGCTGCTCGCGAGCCTGGTCATCGCCGGTGCCTCGGCGATCAGCGGCGACGCGTTCAACGAGTGGGGCTGGCGCATCCCGTTCATCGCCAGCATCGTGATCGTCGTCGTGGGCCTGGCCATCCGGCGCGGGCTCGCCGAGTCCTCCGACTTCACCGAGAACGCCGAGAAGGCGCCCGTCGCGCTGCCGATCAAGCAGGTCCTGCGCGACGACTGGCGCTCGGTCCTGATCGGTGCCGGACTCGGTGCGGCCAACAACGCGCTGTACTACACCGTCGCCACCTACACGCTGGCGTACGTGACCGGCACCCTCGGCGTCGCCAAGGGTGAGACGATCAACCACCTGACGATCGTGTCGGTCTGCTACCTGATCTCGATCCCGATCTTCGGGTGGTTGTCCGACAAGGTCGGGCTGCGCCGCCAGGTCGTCGTCGCGGCCCTGTGCGCCGCCGCGTTCGTCTTTCCCTACTTCTCCATGATCGAGACGGGCGAGTCCTGGATCATCCTGCTGGGCATGATCATCGGCCTGGCCGTCATCCAGTCCGCCGCGTACGCGCCGCAGCCCGCCGTCTACAGCGAGCTGTTCCCGGCGCGCACCCGCTACACCGGCGCCTCGCTGGCCTACGCATTGCCGACGACCGTCGTCGGTGGCACCGCACCCTTCATCGCGACGTGGCTGTTCGCCGAGACCGGCAGCAACACCGCGATGGCCTGGTACGTCGTGGCGCTGTCGCTGCTCGCGGCCGGGTGTGCGGCGCTGGCCCACCGCCGGCACACGTCCTCGCTGACGAAGGAGGCGGCGTCCGTTGTCTGA
PROTEIN sequence
Length: 439
VSDQSVPAPTPRRQSRRAAIGSFVGTTLEWYDFFIYGTTAALVFGQVFFPTQEGVLGTLAAFATFAVGFIARPFGSILFGHFGDRIGRRNVLIATLLIMGGATVLIGLIPSYATIGVWAPVLLVLCRIAQGVALGGEWGGAALLSVENAPARRRGFFGSSTQVGSPAGLLLASLVIAGASAISGDAFNEWGWRIPFIASIVIVVVGLAIRRGLAESSDFTENAEKAPVALPIKQVLRDDWRSVLIGAGLGAANNALYYTVATYTLAYVTGTLGVAKGETINHLTIVSVCYLISIPIFGWLSDKVGLRRQVVVAALCAAAFVFPYFSMIETGESWIILLGMIIGLAVIQSAAYAPQPAVYSELFPARTRYTGASLAYALPTTVVGGTAPFIATWLFAETGSNTAMAWYVVALSLLAAGCAALAHRRHTSSLTKEAASVV*