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cn_combo_scaffold_2355_15

Organism: CN-SCN_Pseudonocardia_86x

partial RP 15 / 55 MC: 1 BSCG 14 / 51 MC: 2 ASCG 7 / 38 MC: 1
Location: comp(15245..16369)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Nocardiopsis gilva RepID=UPI0003605870 similarity UNIREF
DB: UNIREF100
  • Identity: 54.1
  • Coverage: 368.0
  • Bit_score: 377
  • Evalue 1.90e-101
periplasmic binding protein similarity KEGG
DB: KEGG
  • Identity: 45.3
  • Coverage: 351.0
  • Bit_score: 297
  • Evalue 5.30e-78
ABC transporter substrate-binding protein {ECO:0000313|EMBL:GAB13769.1}; TaxID=1077972 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Arthrobacter.;" source="Arthrobacter globiformi similarity UNIPROT
DB: UniProtKB
  • Identity: 44.6
  • Coverage: 377.0
  • Bit_score: 297
  • Evalue 2.00e-77

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Taxonomy

Arthrobacter globiformis → Arthrobacter → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1125
GTGACGATCACGACCCCCGCCGCGGACCTGGGCCGCCGGGCCGTCTCCCGCCGTGGCTTCCTCGGCGCCACCCTCGCCGCGGCGACGCTGGCCGCCTGCTCCCGCCCGGCCGCGCCGGGTGCGCCCGTCGGCGCCGCGGTCTCGGCGACCGACCTCACCGGCGCTCGCATCGACCTGGCGGCCCCCGCGCGCCGGGTCGTCACGATCCCGATCCCGGCGGCGTCGATGGTCGTCGCGGTCAACGGTGGTCCGGACGTGCTCGTCGGCATGAACGCGTCGGCGCAGCAGGCGATCAAGGGTGGCTACCTGGGCGAGGCGTTCCCGCAGCTGCTGTCGGTGCCGTCGGACGTCGCGGGCGAGGACTTCAACCCGAGCGTCGAGCGCATCCTGGCGCTGGAACCCGACGTCGTCGTGCAGTGGGGCGACCGGGGCACCGGCCTGGTCGCGCCGCTGACCGGCGCCGGCCTGCAGGTCGCGCAGCTCACGTACGGCACGCAGGAGTTCCTCGAGGGCGCGGCAACGCTCTACGGGAACCTGCTCGGCAAGCAGGACCGGTCCACGCAGCTGGTGGCGTGGATGCAGGAGCAGCGCAAGGTGCGCGAGGCCGCGGCGTCGGCGGGGCGCGGGCGCAAGGTGCTGTACCTGTCGGCGGTCGCGCAGGGCGTCAAGGTCGCGGGCAAGGGTCAGTACAACGACTTCACGACGCGCCTGGTCGGCGGCACCAACCCGGCGGGCGAGCTGCCCGGCACCCCGGGTGTCGACGTCGAGCAGATCCTCGCGTGGAACCCCGAGATCGTCCTGCTCGGCAACTTCGACCCGACGATGCCCGAGCAGATCCTGTCCGACCCGCGGTGGGCGGCGGTCGAGGCGGTGCGCGCCAAGCGCGTCTACCGGGTGCCGCTGGGCGGGTACCGCTGGGACCCGCCGAACCAGGAGTCGCCGCTGATGTGGGAGTGGCTGGCCGGGCTGGTGGCCGAGGACAGGGTGCCGGCGTCGCTGCCGGAGTCGATCCGCACCAACTACCAGTTCCTCTACGGCACCCGCCCGACCGACGCCCAGATCGCGTCGATCCTGCGCGTCGGTCCCAACAAGGGCACGCCCGGATATGCCGGTCTCGGCACCTGA
PROTEIN sequence
Length: 375
VTITTPAADLGRRAVSRRGFLGATLAAATLAACSRPAAPGAPVGAAVSATDLTGARIDLAAPARRVVTIPIPAASMVVAVNGGPDVLVGMNASAQQAIKGGYLGEAFPQLLSVPSDVAGEDFNPSVERILALEPDVVVQWGDRGTGLVAPLTGAGLQVAQLTYGTQEFLEGAATLYGNLLGKQDRSTQLVAWMQEQRKVREAAASAGRGRKVLYLSAVAQGVKVAGKGQYNDFTTRLVGGTNPAGELPGTPGVDVEQILAWNPEIVLLGNFDPTMPEQILSDPRWAAVEAVRAKRVYRVPLGGYRWDPPNQESPLMWEWLAGLVAEDRVPASLPESIRTNYQFLYGTRPTDAQIASILRVGPNKGTPGYAGLGT*