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cn_combo_scaffold_3307_16

Organism: CN-SCN_Pseudonocardia_86x

partial RP 15 / 55 MC: 1 BSCG 14 / 51 MC: 2 ASCG 7 / 38 MC: 1
Location: comp(17253..18863)

Top 3 Functional Annotations

Value Algorithm Source
Histidine kinase internal region n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CUF0_PSEUX similarity UNIREF
DB: UNIREF100
  • Identity: 64.3
  • Coverage: 498.0
  • Bit_score: 588
  • Evalue 7.60e-165
histidine kinase similarity KEGG
DB: KEGG
  • Identity: 64.3
  • Coverage: 498.0
  • Bit_score: 588
  • Evalue 2.20e-165
Histidine kinase internal region {ECO:0000313|EMBL:AEA25340.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxaniv similarity UNIPROT
DB: UniProtKB
  • Identity: 64.3
  • Coverage: 498.0
  • Bit_score: 588
  • Evalue 1.10e-164

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Taxonomy

Pseudonocardia dioxanivorans → Pseudonocardia → Pseudonocardiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1611
ATGGGCCGGGCGGGCACGGGCGGGATGCCCGACCTGGTGCCGCCCATGCAGGCGGCCACCGGGGAGCTGCCGACCGGCTCGGGCTGGGCCGTCGAGTTCGCATGGGACGGGTTGCGCTGCATCGCCTACGCGCGCCCCGGCCGTGTCCGGTTGCTCACCGCCCGGGACCGGTCGGTCACCTCGGCGTTCCCGGAGCTGCACGTGCTCGCGGCGAAGGCCCCGCAGGGTGGCGTGATCCTCGACGGGACCGTCGTCGCGCTCGACGACGCGGGTGTCCCGAGCCGGCGGCTGCTGATGCGCCGCACCGCGACCCAGCGGCCGGGCGCCTCGCTGGTGGTCGACGTGCCGGTGGGCTTCTTCGTCAGCGACCTGCTGTGGCTCGACGGTGAGTCGACGACGGCGCTGCCCTACCAGCGGCGCCGCGAGTTGGTCGACGACCTCGGCCTGGCCGAGCAGCCCGTGGTGCTGTCGCCGTCGTGGCCGGCGGGCGACGCGGGCCACGTGCTGGCGACGGCGCGCCGCTACGGCCTCGACGGGGTGTACGCCAAGCGGCTCGACTCGGCCTACCAGCCGGGACGGCGGTCGCGGAACTGGCTGCGGGTGCCGCTGCGCCAGTCGCGGCAGGTCGTCATCGGCGGGTGGACGCCCGCCTCGCCCGACCGCCCCGACACCGTGGCCGCGCTGCTGCTGGGCGTGCCCGGATCGGCGGGGCTGCGCTACGTCGGCAGGGTGGGCCTGGGTGCGGGCGCCCCGCGGGCGGCGGTGACCGCGCTGCTGCCCGACCTCGGTACCGACGACTCGGCCTTCGCAGGCGGCGTGCCGGCGGGTGTGTCGCGCGACGCCCGGTGGGCGGTGCCGCGGCTGGTCGGGCAGGTCGAGTTCACCGAGTGGACGGCCGGTGGGCGGCTGCGGCTGCCGGTGTGGCGGGGTCTCGTCGCGCCCGAGGACGTCGAGGACGGCCTGTGGGACGACGGGTTCGCCGACGACGAGCGCTGGGACGACGAGACCGACAGCGAGGCCGGCACCGTCGACCTCGACGGCCCCGAGGAACCCGCGGCACCGCAGGCCGCGTCACCGCCGGAGGCCTCGGAGGTGACGGAGGCGACGGAGGCGACGGAGGCGACGGAGCGCCCTGAGCCGCTCCCCGACCCGGTCGCCCGCGCGCAGGCCCGGCGCCTCGAGCAGCACTTCGTCTACAACTCGCTCAACACGATCGCCTCGCTCGTGCGCACCGACCCGGGCCGGGCCCGGGAGCTGCTGCTGGGGTTCGCCGACCTGACCCGCGCGGCCGACCGTCCCACCGACGACGCGATCACGCTGCGCGACGAGCTCGACTCGGTGCGGGCCTACCTCCAGCTCGAGCAGGCCCGGTTCGGGAAGCGGCTCACGGCGCAGGTGTCGTCGGCACCCGGTCTCGACGATCTCCCGGCCACCCCGATGGAGGTGCTCGCCCAGGTCAGGGCTGTGGTCCAGGAGGTCGTGGAGCCACGTCCCGAGGGCGGCGGGGTCACCGTGGAAGCGGCCGCCGACGGCGAGCACTACGTCGTCACGATCACCGAGACGGCCACCGCGCAGACGTGGACGATCCGCCCCGCCGCCGCCACACTCTGA
PROTEIN sequence
Length: 537
MGRAGTGGMPDLVPPMQAATGELPTGSGWAVEFAWDGLRCIAYARPGRVRLLTARDRSVTSAFPELHVLAAKAPQGGVILDGTVVALDDAGVPSRRLLMRRTATQRPGASLVVDVPVGFFVSDLLWLDGESTTALPYQRRRELVDDLGLAEQPVVLSPSWPAGDAGHVLATARRYGLDGVYAKRLDSAYQPGRRSRNWLRVPLRQSRQVVIGGWTPASPDRPDTVAALLLGVPGSAGLRYVGRVGLGAGAPRAAVTALLPDLGTDDSAFAGGVPAGVSRDARWAVPRLVGQVEFTEWTAGGRLRLPVWRGLVAPEDVEDGLWDDGFADDERWDDETDSEAGTVDLDGPEEPAAPQAASPPEASEVTEATEATEATERPEPLPDPVARAQARRLEQHFVYNSLNTIASLVRTDPGRARELLLGFADLTRAADRPTDDAITLRDELDSVRAYLQLEQARFGKRLTAQVSSAPGLDDLPATPMEVLAQVRAVVQEVVEPRPEGGGVTVEAAADGEHYVVTITETATAQTWTIRPAAATL*