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cn_combo_scaffold_3340_17

Organism: CN-SCN_Pseudonocardia_86x

partial RP 15 / 55 MC: 1 BSCG 14 / 51 MC: 2 ASCG 7 / 38 MC: 1
Location: comp(13570..14232)

Top 3 Functional Annotations

Value Algorithm Source
Putative transcriptional regulator n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4D0I4_PSEUX similarity UNIREF
DB: UNIREF100
  • Identity: 68.2
  • Coverage: 211.0
  • Bit_score: 285
  • Evalue 4.40e-74
transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 67.8
  • Coverage: 211.0
  • Bit_score: 284
  • Evalue 3.60e-74
Putative transcriptional regulator {ECO:0000313|EMBL:AEA26780.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxan similarity UNIPROT
DB: UniProtKB
  • Identity: 67.8
  • Coverage: 211.0
  • Bit_score: 284
  • Evalue 1.80e-73

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Taxonomy

Pseudonocardia dioxanivorans → Pseudonocardia → Pseudonocardiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 663
GTGAGCCCGCGCCGCGTGTCCGCCCGCCGTGACGAGGTCCTCGCCGCCCTCCGCGCGGCTGCGGAACCGCTGGGCGTCGCCGAGCTGGCCGAGGCACTCGTCCTGCACCCCAACACCGTGCGGTTCCACCTCGACGCGCTGCTGGACGCCGGCCGGGTCGAGCGGGTCGCCGCGCCCCCTTCCGGGCCGGGACGCCCGGCACTGCTGTTCCGCGTCCACCGTGGGATGGACCCGGCGGGCCCTCGCAACTACCGCCTGCTCGCCGCGGGGCTCGCCGACGGGCTGGCCGCAGGGCCCGACCCGGCAACGGCCGCCCGTGCCGCCGGGCACGCCTGGGGCGGCCGGATGGTCGACACCACGACGACCCGTTCGCGCGCCGGCGCGATCGACGCGCTGGTCGCCCTGCTGGACGACATCAGGTTCGCCCCCGTGTGGCCTGCGCCCGGAGGCCACGACGAGCGGATCGGCCTGCGGCACTGTCCGTTCCTGGAGCTGATCGAGACCCGGTCCGACGTCGTCTGTCCCTTGCACCTCGGACTGATGCAGGGCGCGATGAGCGCTCTCGACGCCCCGGTCACGATCGAACGGCTCGAACCCTTCGCCGCCGACGACCTCTGCCTCGCCCACCTGTCCCCGACCGCCCCCCGAGAGGACGTCCGCTGA
PROTEIN sequence
Length: 221
VSPRRVSARRDEVLAALRAAAEPLGVAELAEALVLHPNTVRFHLDALLDAGRVERVAAPPSGPGRPALLFRVHRGMDPAGPRNYRLLAAGLADGLAAGPDPATAARAAGHAWGGRMVDTTTTRSRAGAIDALVALLDDIRFAPVWPAPGGHDERIGLRHCPFLELIETRSDVVCPLHLGLMQGAMSALDAPVTIERLEPFAADDLCLAHLSPTAPREDVR*