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cn_combo_scaffold_3438_16

Organism: CN-SCN_Pseudonocardia_86x

partial RP 15 / 55 MC: 1 BSCG 14 / 51 MC: 2 ASCG 7 / 38 MC: 1
Location: comp(13281..13988)

Top 3 Functional Annotations

Value Algorithm Source
Tetracyclin repressor domain-containing protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CWH0_PSEUX similarity UNIREF
DB: UNIREF100
  • Identity: 63.9
  • Coverage: 205.0
  • Bit_score: 252
  • Evalue 3.30e-64
putative transcriptional regulator, TetR family protein similarity KEGG
DB: KEGG
  • Identity: 60.3
  • Coverage: 232.0
  • Bit_score: 255
  • Evalue 1.10e-65
Putative transcriptional regulator, TetR family protein {ECO:0000313|EMBL:AIS01432.1}; TaxID=1907 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Strept similarity UNIPROT
DB: UniProtKB
  • Identity: 60.3
  • Coverage: 232.0
  • Bit_score: 255
  • Evalue 5.50e-65

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Taxonomy

Streptomyces glaucescens → Streptomyces → Streptomycetales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 708
ATGGACGCTGTCTGGGAACGGCCGGAACCCACCGGCCGCGCCGCGCTCACCCCGCTCAGCCGCGCCGCGATCGTCGCTGCCGCCATCAGGCTCGCCGACGCCGGCGGCCTCGACGCCGCCTCCCTCCGCAAGGTCGGCGCCGCCCTCGACGCAGGACCTATGCGCCTCTACGGCTACGTCGCCACCAAGGACGAGCTCCTCGACCTCATGGTCGACGAGGTCCACGCCGAGATCGACGTCCCCACCGGCACCGACTGGCGAACCACCCTCGACGCCTGGGCCCACCACACCCGCGCCGCCGCCCTCCGCCACGAATGGCTCGTCGACCTCCTCGGTGACCGGCCGGCCCTCGGCCCCCACGCCCTCGCCGTCGGCGAAGCCACTCTCGCCGCTGTCGTCACCCGCTTCCCCGCCATCGACGACGCCCGCCGCGCCATCACCACCCTGCGCGCCTACGTCAACGGCGCCCTCCGCGCCGAGATCGGCGAGCTCCGCGCCGCGCGCACCACCGGCCTCGACAAGCACGACTGGCAGGCCACCCACGGCCCCTACCTGATGCGCGTCCTCGCCGAGGGCAACCACCCCCACGTCGCGCGGCTCGTCACCGATGGCACCGACGACGACCCCGCCACTGTCTTCGCCACCGGACTCGACATCGTCCTCACCGGCATCGCTACGGTGAGCCGATGGCCACCTCCTGGAGCCTGA
PROTEIN sequence
Length: 236
MDAVWERPEPTGRAALTPLSRAAIVAAAIRLADAGGLDAASLRKVGAALDAGPMRLYGYVATKDELLDLMVDEVHAEIDVPTGTDWRTTLDAWAHHTRAAALRHEWLVDLLGDRPALGPHALAVGEATLAAVVTRFPAIDDARRAITTLRAYVNGALRAEIGELRAARTTGLDKHDWQATHGPYLMRVLAEGNHPHVARLVTDGTDDDPATVFATGLDIVLTGIATVSRWPPPGA*