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cn_combo_scaffold_4154_11

Organism: CN-SCN_Pseudonocardia_86x

partial RP 15 / 55 MC: 1 BSCG 14 / 51 MC: 2 ASCG 7 / 38 MC: 1
Location: comp(10839..11093)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Dehalobacter sp. FTH1 RepID=UPI00035FF16E similarity UNIREF
DB: UNIREF100
  • Identity: 46.9
  • Coverage: 81.0
  • Bit_score: 75
  • Evalue 3.40e-11
rpsA; 30S ribosomal protein S1 similarity KEGG
DB: KEGG
  • Identity: 41.1
  • Coverage: 90.0
  • Bit_score: 67
  • Evalue 2.60e-09
RNA binding S1 domain protein {ECO:0000313|EMBL:ACQ80445.1}; TaxID=471853 species="Bacteria; Actinobacteria; Micrococcales; Beutenbergiaceae; Beutenbergia.;" source="Beutenbergia cavernae (strain ATCC similarity UNIPROT
DB: UniProtKB
  • Identity: 41.1
  • Coverage: 90.0
  • Bit_score: 67
  • Evalue 1.30e-08

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Taxonomy

Beutenbergia cavernae → Beutenbergia → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 255
GTGAGCGAATCCCATGGCAGCACGCCGGAGCGGGCGTGGCAGCAGTTCCTCACGGCGCAGTGCGGGCGTACGACGCTCGAGGGCGTCGTCGTGTCTGTGCTCCCGTTCGGGGCGTTCGTGCGTCTGGCCGACGGTGTCGACGCGATCCTGCACGTCTCCGAGTGGGCTCGTGAGCCGCAGCTCGGCGAGATCGTGACGGTGCGGGTCATCGCGCTCGACATGACCCGCCGCCGGATCAGCCTGACCGCGGCCTGA
PROTEIN sequence
Length: 85
VSESHGSTPERAWQQFLTAQCGRTTLEGVVVSVLPFGAFVRLADGVDAILHVSEWAREPQLGEIVTVRVIALDMTRRRISLTAA*