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cn_combo_scaffold_4206_14

Organism: CN-SCN_Pseudonocardia_86x

partial RP 15 / 55 MC: 1 BSCG 14 / 51 MC: 2 ASCG 7 / 38 MC: 1
Location: comp(11571..13343)

Top 3 Functional Annotations

Value Algorithm Source
2-isopropylmalate synthase {ECO:0000256|HAMAP-Rule:MF_00572, ECO:0000256|SAAS:SAAS00085054}; EC=2.3.3.13 {ECO:0000256|HAMAP-Rule:MF_00572, ECO:0000256|SAAS:SAAS00085054};; Alpha-IPM synthase {ECO:0000 similarity UNIPROT
DB: UniProtKB
  • Identity: 95.7
  • Coverage: 558.0
  • Bit_score: 1098
  • Evalue 0.0
2-isopropylmalate synthase (EC:2.3.3.13) similarity KEGG
DB: KEGG
  • Identity: 95.7
  • Coverage: 558.0
  • Bit_score: 1098
  • Evalue 0.0
2-isopropylmalate synthase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CS72_PSEUX similarity UNIREF
DB: UNIREF100
  • Identity: 95.7
  • Coverage: 558.0
  • Bit_score: 1098
  • Evalue 0.0

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Taxonomy

Pseudonocardia dioxanivorans → Pseudonocardia → Pseudonocardiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1773
ATGAGCATCTCTCCCGACGCCTACACGTCGTCGACGAGCAGTCGCGTACGCACGCCGTCGAATCCCGCGCCCGCCGACCAGGCCCCCTGGAACCCGCAGCGCGGCTCGCACCTGCCGTTCCACCGCTACCGGCCCTTCCACGAGATGGTCGAGCCGGTCTCACTGAGCGACCGCACCTGGCCCGACACCCGCATCACCAAGGCCCCGATGTGGTGCGCGGTCGACCTGCGCGACGGCAACCAGGCCCTGATCGACCCCATGAGCCCCGCGCGCAAGCGCCGCATGTTCGACCTGCTGGTACGCATGGGCTACAAGGAGATCGAGGTCGGCTTCCCCGCCGCCAGCCAGACCGACTTCGACTTCGTCCGCGAGATCATCGAGACCGACGCCATCCCCGACGACGTCACCATCCAGGTGCTGACGCAGGCCCGGCCCGAACTCATCGAGCGCACCTACGAGGCCTGCGAGGGCGCGCCCCGCGCGATCGTCCACCTCTACAACTCGACGTCGATCCTGCAGCGCCGCGTCGTCTTCCGCTCCGACCGCGCCGGCATCTCCAAGATCGCCACCGACGGGGCCGAGGACGTCCTGCGCTTCTCCGAGAAGTACCCGAACACCGACTGGCGCTTCGAGTACTCCCCCGAGTCCTACACCGGCACCGAGCTGCAGTACGCCGTCGACGTCTGCAACGCCGTCAGCGAGATCTGGCAGCCCACCCCCGAGTCGCCGATGATCGTCAACCTGCCGGCGACCGTCGAGATGGCCACGCCCAACGTCTACGCCGACTCCATCGAGTGGATGCACCGCAACCTGGCCCGTCGTGAGGGGATCGTGCTGTCGCTGCACCCCCACAACGACCGCGGTACCGGCGTCGCCGCCGCCGAGCTCGGCTACCAGGCCGGTGCCGACCGCATCGAGGGCTGCCTGTTCGGCAACGGGGAGCGCACCGGCAACGTCGACCTGGTCACCCTGGGCATGAACCTCTTCACCCAGGGCGTCGACCCGCAGATCGACTTCTCCGACATCGACGAGATCCGCCGCACCGTCGAGTACTGCAACCAGCTGCCCGTCGCCGAGCGCCACCCCTGGGGCGGTGACCTCGTCTACACCGCCTTCTCCGGCAGCCACCAGGACGCCATCAACAAGGGCTTCCAGGCCATGGAGGCCGACGCGGGCGAGGCCGGAGTCGCCGTCGACGACTACCGCTGGGAGGTCCCGTACCTGCCCGTCGACCCCAAGGACATCGGTCGCAGCTACGAGGCCGTCATCCGGGTCAACTCGCAGTCGGGCAAGGGCGGCGTCGCCTACATCATGAAGGCCGAGCACCAGCTCGACCTGCCGCGGCGGCTGCAGATGGAGTTCTCGAAGGTCATCCAGAACTACACCGACACCGAGGGCGGCGAGGTCTCCCCCAAGGAGATGCGCGACGCCTTCGACGTCGAGTACCTCGACCGCGCCACCCCGCTGAAGCTGCTGCGCCACAAGCTCACCAGCGACGGCGAGGGTCGCGACGAGATCGTCGCCACCGTGCGCGTCGAGGCCGACGTCCATGAGATCAGCGGCAGCGGCAACGGCCCCATCGCGGCGTTCGTCGACGCGCTCGCCGGCATCGGGTTCGACGTCCGCGTCCTCGACTACCACGAGCACGCGCTGTCCTCGGGTGACGACGGAGAACAAGGTCCTCTGGGGCGTCGGGATCGACAGCTCCATCGTCAGCGCCTCGCTCAAGGCCGTCGTGTCGGCCGTGAACCGGGCCATGCGCTGACCCACTGA
PROTEIN sequence
Length: 591
MSISPDAYTSSTSSRVRTPSNPAPADQAPWNPQRGSHLPFHRYRPFHEMVEPVSLSDRTWPDTRITKAPMWCAVDLRDGNQALIDPMSPARKRRMFDLLVRMGYKEIEVGFPAASQTDFDFVREIIETDAIPDDVTIQVLTQARPELIERTYEACEGAPRAIVHLYNSTSILQRRVVFRSDRAGISKIATDGAEDVLRFSEKYPNTDWRFEYSPESYTGTELQYAVDVCNAVSEIWQPTPESPMIVNLPATVEMATPNVYADSIEWMHRNLARREGIVLSLHPHNDRGTGVAAAELGYQAGADRIEGCLFGNGERTGNVDLVTLGMNLFTQGVDPQIDFSDIDEIRRTVEYCNQLPVAERHPWGGDLVYTAFSGSHQDAINKGFQAMEADAGEAGVAVDDYRWEVPYLPVDPKDIGRSYEAVIRVNSQSGKGGVAYIMKAEHQLDLPRRLQMEFSKVIQNYTDTEGGEVSPKEMRDAFDVEYLDRATPLKLLRHKLTSDGEGRDEIVATVRVEADVHEISGSGNGPIAAFVDALAGIGFDVRVLDYHEHALSSGDDGEQGPLGRRDRQLHRQRLAQGRRVGREPGHALTH*