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cn_combo_scaffold_4261_6

Organism: CN-SCN_Pseudonocardia_86x

partial RP 15 / 55 MC: 1 BSCG 14 / 51 MC: 2 ASCG 7 / 38 MC: 1
Location: comp(5774..7165)

Top 3 Functional Annotations

Value Algorithm Source
Transmembrane efflux protein n=1 Tax=Rhodococcus sp. S9 RepID=Q9L4T5_9NOCA similarity UNIREF
DB: UNIREF100
  • Identity: 47.4
  • Coverage: 449.0
  • Bit_score: 383
  • Evalue 2.50e-103
Putative multidrug resistance transporter, MFS superfamily protein {ECO:0000313|EMBL:KJU99856.1}; TaxID=1356405 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" sourc similarity UNIPROT
DB: UniProtKB
  • Identity: 48.2
  • Coverage: 450.0
  • Bit_score: 386
  • Evalue 4.10e-104
transmembrane efflux protein similarity KEGG
DB: KEGG
  • Identity: 46.1
  • Coverage: 449.0
  • Bit_score: 357
  • Evalue 5.40e-96

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Taxonomy

Rhodococcus sp. PML026 → Rhodococcus → Corynebacteriales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1392
ATGACCGCGAACGGGCGCTGTCTCGCCATCACCGCCGGCGGCACCTTCGTGGCGATGACGGCGTTCACCGCGCCGCTCTCGATCGTCCCGGCGGTGGGTGCCGACCTCGGGGCGGGCCCCGTCGGCACCGCGTGGATCCTCAGCTCGATGAGCCTCGGGCTCGCCGTGGCACTGCTCAGCGCCGGTGCGATCGGCGACGTCGTCGGGCGACGGCGGATGTTCGTCGTCGGCGCTGTCCTCACCGCGGCCGGGGCAGCGGTGTCGGGCGTCGCGCCCTCCACAGCGGTGTTCGTCGCGGGGCGGGTCGTGCAGGGGATCGGCAGCGCCGCACTCGTCGCGTGCGCGCTCGCCCTGATCAGCGCCGCCTTCGCTCCTGGCCCGCCCCGAACCCGTGCGACCGCCGTCTGGGGCGCGGCGATGGGCGCGGGCCCCACCGTCGGCCCGCTGCTCGGGTCGGTCAGCGACGCCGTCGACAGCTGGCGGTGGAGCTACCTCGTGCTCACCGTCCTGTCCGCGGGCATCGCGGTGGCCGGGCAGCGATGGCTCGCCGAGTCGCGGGGCGACACCACCCGGCACATCGACGTCGTCGGCGCGCTGCTGCTCGGCGTCGGGCTCGGGTGCCTGCTCGCCGCCCTCACCGAGGGCCGCCAGGGCTGGACCCAGCCGCTCGTCGCGGTGCTCGGCGCCGCCGCCGTGGTCGCGCTCGTCGCCACCGGTGTCCATCTCGCGCGCAGTGCCGAGCCGCTGTTCCCACCGTCGCTGTTCCGCAGGCCCGCGCTCGTCGGCGCCACGCTGGCGGCGTTCGTCACCGGCGGCGCGATCATCGGGCTGATGTCGTTCATCGGCACCGTCCTCGAACGCGGGCTGGCGCACACCGCCGTCGCGGCGTCGGCGATCCTCCTGGCCTGGTCGCTGCTCAGCGTGGTGGCCTCGCTCGGAGCCCGCTGGCTGCCCGCCGGCCTGTCCGGTGGCGCGCGGCTCGCGCTCGGGCTGGCCGTGGCCGCGGTCGGGTTCGTGCCGCTCGCGCTGCTCACCCCGGCGAGCGGGCTGTGGGCGTTGCTGCCCGGGCTGATCGTGTCGGGCGCCGGGACCGGGCTCGCCAACGCCACGCTCGGCCGGGAGGCCGTCGCGGCGGTCCCGCCCGAGCGGGCCGCCACCGGCAGCGGCATCAACAACTCCGCCCGCTACGTCGGCGCGGCCTTCGGCGTCACCATCGCGACGGTGCTGGCGATCCGCCCCGACTCCCCCGACCCGGTCGCGAGCCTCGTGAGCGGCTGGAACGTCGCGGTGTGGGGTGGCGTCGCCGCATGCCTGATCGGCGCGGTCGGGGTCCCGCTGCTGCAACGCGCCGACGACCGCCGCCTCGCCCGGACGGCCGCGGCCACCGTGTAG
PROTEIN sequence
Length: 464
MTANGRCLAITAGGTFVAMTAFTAPLSIVPAVGADLGAGPVGTAWILSSMSLGLAVALLSAGAIGDVVGRRRMFVVGAVLTAAGAAVSGVAPSTAVFVAGRVVQGIGSAALVACALALISAAFAPGPPRTRATAVWGAAMGAGPTVGPLLGSVSDAVDSWRWSYLVLTVLSAGIAVAGQRWLAESRGDTTRHIDVVGALLLGVGLGCLLAALTEGRQGWTQPLVAVLGAAAVVALVATGVHLARSAEPLFPPSLFRRPALVGATLAAFVTGGAIIGLMSFIGTVLERGLAHTAVAASAILLAWSLLSVVASLGARWLPAGLSGGARLALGLAVAAVGFVPLALLTPASGLWALLPGLIVSGAGTGLANATLGREAVAAVPPERAATGSGINNSARYVGAAFGVTIATVLAIRPDSPDPVASLVSGWNVAVWGGVAACLIGAVGVPLLQRADDRRLARTAAATV*