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cn_combo_scaffold_4681_2

Organism: CN-SCN_Pseudonocardia_86x

partial RP 15 / 55 MC: 1 BSCG 14 / 51 MC: 2 ASCG 7 / 38 MC: 1
Location: comp(972..4877)

Top 3 Functional Annotations

Value Algorithm Source
WD40 repeat-containing protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CVC5_PSEUX similarity UNIREF
DB: UNIREF100
  • Identity: 68.7
  • Coverage: 999.99
  • Bit_score: 1743
  • Evalue 0.0
WD40 repeat-containing protein {ECO:0000313|EMBL:AEA23189.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivor similarity UNIPROT
DB: UniProtKB
  • Identity: 68.7
  • Coverage: 999.99
  • Bit_score: 1743
  • Evalue 0.0
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 68.7
  • Coverage: 999.99
  • Bit_score: 1743
  • Evalue 0.0
  • rbh

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Taxonomy

Pseudonocardia dioxanivorans → Pseudonocardia → Pseudonocardiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 3906
ATGGCGCACGACGTGCACGGCTCCGGCCCGGGCCGTCCCGACCGGGCCGACCCCTCCCGGGCGAACGACCGCGACAGCTTCGTCGTCGAGCTCCAGCTCCTGAAGGATCGCAGCGGCCTCAGCTTCCGGGACATCGCCCGCGGCACCGGCGGCGGGAAGGGTGAGCACCCGCTGCCGTTCACCTCCATCCGTGACTACGTCAGCGGCACCTCCCTACCTCCCGCCGACCGGCTCGACCGGATCGTGCGGGCGTTGGGGGAGAAGGAGGCCGCCGTCGAGGGATGGCTCGCGGCCCTGCACCGGGTGCGTGACGCCGCCCGCGCCCCGGCGGCCCTGGCCGGCGAGCCGATGCCCGGCTCGGCCCTGACGGAAGGGTCGGTGGCGCCGTGCCCCTACAGGGGCCTGGCCGCCTACCGCGTCGAGGACGCCGACGTGTTCCACGGCCGCGACCGGCTCCTGACCGACCTGTTGCGCCGGCTCCGGCCGCTCGCCACGACGGGCGGGCTGCTGACGGTCGTGGGGCCGTCGGGGTCGGGCAAGTCGTCGCTGCTGCACGCCGGGCTGGTCCCCGCGCTGCTGCGCGGTGAGGTCGTGGCGCCGGACGGGGCGCCGTGGCACGTCGCCGTCTTCGTGCCGGGCGGGGACCCGGCGACGACGCTCGCCGAGCACATCGTCTCCGCGGGTGGCGGACCGGCGGTGATCGTCGTCGACCAGCTCGAACAGATCTTCACCGGCGCGGCCGGCGCGGCCGAGCGGGACGCGTTCCTGCGGATGGTCAGCGAGGTCGGCGAGGGTGGGGCGGGCGCGCCCGTCATCACCGTGCTGGGGCTGCGGGCCGACTTCTACGCCCAGGCGCTGTCGAACGAGTACCTGCTGCGGCCGCTGTCGGTGGCGCAGGTGACCGTCGGCCCGATGTCCGACGACGAGCTGCGCGCCGTCATCACCGCCCCGGCCCGCGACGTCGGGGTGGAGGTCGAGCCCGGGCTCGTGGAACTGCTGGTCGCGGAGCTGCGCGCGGGCGACGAGCTGCCGGTGGCGTCGCTGCCGCTGCTGTCGCACGCGCTGGCGTCGACGTGGGAGCACGGCGGGGGCCGGATGACGGTCGCGGCCTACCGGGACGCGGGCGGGCTGCGCGAGGCGGTCGCCGACACCGCGGAGCGGGTGTGGAGCGGCCTGCCCGACGACCTGCACGACCTGACCCGCAAGGTGTTGCTGCGCCTGGTGCGCACGACGCCCGAGGTGGCCGACACCCGTCGCCGCGCGACCCGCGAGGAGCTGCTGGGGCCGCCGGGGGAGGAGGACGCCGCCGTCGCGGGCATCGTCGACCACTTCGTCGCGGCCCGGCTGGTGAGCCTCGACGCGGGCGTCGTCCAGATCGCCCACGAGGTGCTGCTGCGGGCGTGGCCGCGGCTGGCGGGCTGGCTGACCGAGGACCGGGTCGCCCGGTCGGCGCGGGGCCGGCTCACCGAGGGTGCCCGGATCTGGCGTGACACCGGCCGTGACGACGGCGCGCTGCTGCGGGGACGGGTCCTGGACGACGCGGAGTGCGCCGCGGCCGCCGACGACCTGCTCCCCGCGGAGACCGAGTACCTGGGCGCGAGCGTGGCCCGCCGCGACCGGGAGCTCGCCGACAGCCGGCGCGGGACCCGGCGGCTGCGGTCCGTGGTCGCGGTGCTGGTCGTCCTCGTGCTGGCGGTGGGCGCGCTCGCCGTGGTGGCGACGGTCCAGCGCGTCACCGCCGTGACCGCCCGCGACACCGCGACGTCGCGGGAGCTGGCCGTGCAGGCCGAGACCCTGCGCGAGTCCGATCCCGGCCTCGCCGCGCAGCTGTCGGTGGCTGCCTACCGGATCTCCCCGACCGACGCCGCCCGCTCGAGCCTGCTGGAGTCGACGACGGCGTCCACGTCGACACGGCTGCTTTCCCCGACGGGGAAGGCGCGGCAGGCCGTGGTGTCGGCCGACGGGCGCACGATGCTCACCGTCGACGCCGCGGAGGGCACGGCGCACGCGATGCTGCAGCGCTGGGACGTCTCCGGCCCGGGACGCCCGCTGCCGCTGGGCCCGGCCGTCGACACCGGGCAGGCGGGCGCCGACTACGGCCTGGTGATCAGCCCCGACGGGCGCACCGCCGCGACGGCGGGCACCGGCAAGACCGTCCGGCTGTGGAACCTGGCCGCGGGCGGGCCGCCGCGTCCGCTCACCGAGCTCCTGCCCGGACCGGCCGACACCGTGTACAGCCTGGCGTTCTCCGCCGACAGCACGGTCCTCGCGGTGGCCGACGCAGCCGGTTCGGTGACCCGGTTCGCGGTCGCCCCCACCCGGCCCGGCGCCGCGGGAGCCGCACTGGCAGCCGGTGCCGGAGCGGTGCGGGTGCTGGCGTTCGCGCCGTCCGGGCGGCTGCTGGCCACCGGCGGCGCCGACGGCCTCGTCCGGCTCTGGGACCTCACCGACCCGGCCGCGCCGCAGCCCCTCGGCACCCCGTTCGGCGACGGCAAGGCCGTCCTCGCGCTCGCGTTCACCCGCGACGGGACCCGGCTCGCCGCGTCGGGTATGGCCCGCACCGTCACGCTGTGGAACGTCACCGACCCGAGGGCGCCCGTCGCCGCCGGTGCGCCGCTGGTGGGGCCGACCGCGCAGGTCAACAGCCTCGCCGTCAGCCCCGACGGCACCACGCTGGCCGGTGCGTCGTCCGACGACCGGCTGTGGACCTGGGACCTCGCCACGGGCGCGTCGACGGGGAGCAGGCCGCACCCGTCGACGGTCGTGCAGGTCGGCTACGACGCCGGCGCAGAGTCGGGTGGGGGCAGGCTCGTCACCGTCGGCGGCGACGGCACCGTCCGCGTCTGGGACGCGGGCGACGCCCGGATCCGCGACCCCCGCGACACCGTGTTCGCCATGGACTGGCTGCCCGACAGCCAGTCCGTCGCGCTCGGTGTCGGCGGATCGGCCAAGAACGTCCGGCTGTGGAACGTCACCGACGCCCGCGCCCCGGCCGCGCTCACCCCCGCGCTCGGGGCCCCCGCCGGCGCGCCCCCGCTGTCCGGGTCGGTCGCGACCAGCCCGGACGGGCGCGTCGTCGCCTCCGGGGCCACCGACGGCGGCGTGCGGGTCTGGGACCTCGGCCCCGGCGGCGCGGTCGCGCGGCCGGCCCTGCCCGGCGACGGCGCGCTCGTCGAACAGGTCGTGTGGAGCCCCGACGGGCGGACCCTCGCCGCGGCCGGTGACGACAACGCCGTGCGGCTCTTCGACATGACCCGCCCGCCCGGACCGCCCGTCGCGACCCTCACCGGCGCGGACAGCTACGTGTTCGGCGCGGCGTGGAGCCCCGACTCGCGGACGTTGGCCGCCGTGTCCGCCGACGGCACCCTCCGGCTCTGGGACGTCGCCGACCCGGCCCGGGCGCGGTCGTCCGGCGATCCGGTGCCCGCCGGTGCGGGCTACGCCTACGGGGTGTCGTTCAGCCCCGACGGGCGCCGCGTCGCCACCGGCACCGCCGACCGGACCGTCCGGCTCTGGGACGTCACCGACCCCGCCCACCCGCGGCAGATCGGCGAACCCCTGACCGGGCCCGGCAACACCGTCTTCGGCCTCGGCCACAGCCACGACGGCCGCTTCCTCGCCGCGGCCAGCGGCGACGGCTCCGTCCGGGTCTGGGACGTCCACGACCCGGCGCACCCGGTGCCGTGGGCGACCCTGCACGGCGGTCTCACCGCAACCGTGTGGACGGCCGTCTTCAGCCCCGACGGGTCACGGCTGGCCGCCGCGGGTGCCGACGGCTGGGTCGACATGTGGACCGTCGACCCGGAGGCCGCTGCCACCGCCGTCTGCGCGAACGCCGGTGACGCCGTGACCCCGGCCGAGTGGGCCCGGTTCCTGCCGGACACGCCGTACCGGAACCCGTGTTGA
PROTEIN sequence
Length: 1302
MAHDVHGSGPGRPDRADPSRANDRDSFVVELQLLKDRSGLSFRDIARGTGGGKGEHPLPFTSIRDYVSGTSLPPADRLDRIVRALGEKEAAVEGWLAALHRVRDAARAPAALAGEPMPGSALTEGSVAPCPYRGLAAYRVEDADVFHGRDRLLTDLLRRLRPLATTGGLLTVVGPSGSGKSSLLHAGLVPALLRGEVVAPDGAPWHVAVFVPGGDPATTLAEHIVSAGGGPAVIVVDQLEQIFTGAAGAAERDAFLRMVSEVGEGGAGAPVITVLGLRADFYAQALSNEYLLRPLSVAQVTVGPMSDDELRAVITAPARDVGVEVEPGLVELLVAELRAGDELPVASLPLLSHALASTWEHGGGRMTVAAYRDAGGLREAVADTAERVWSGLPDDLHDLTRKVLLRLVRTTPEVADTRRRATREELLGPPGEEDAAVAGIVDHFVAARLVSLDAGVVQIAHEVLLRAWPRLAGWLTEDRVARSARGRLTEGARIWRDTGRDDGALLRGRVLDDAECAAAADDLLPAETEYLGASVARRDRELADSRRGTRRLRSVVAVLVVLVLAVGALAVVATVQRVTAVTARDTATSRELAVQAETLRESDPGLAAQLSVAAYRISPTDAARSSLLESTTASTSTRLLSPTGKARQAVVSADGRTMLTVDAAEGTAHAMLQRWDVSGPGRPLPLGPAVDTGQAGADYGLVISPDGRTAATAGTGKTVRLWNLAAGGPPRPLTELLPGPADTVYSLAFSADSTVLAVADAAGSVTRFAVAPTRPGAAGAALAAGAGAVRVLAFAPSGRLLATGGADGLVRLWDLTDPAAPQPLGTPFGDGKAVLALAFTRDGTRLAASGMARTVTLWNVTDPRAPVAAGAPLVGPTAQVNSLAVSPDGTTLAGASSDDRLWTWDLATGASTGSRPHPSTVVQVGYDAGAESGGGRLVTVGGDGTVRVWDAGDARIRDPRDTVFAMDWLPDSQSVALGVGGSAKNVRLWNVTDARAPAALTPALGAPAGAPPLSGSVATSPDGRVVASGATDGGVRVWDLGPGGAVARPALPGDGALVEQVVWSPDGRTLAAAGDDNAVRLFDMTRPPGPPVATLTGADSYVFGAAWSPDSRTLAAVSADGTLRLWDVADPARARSSGDPVPAGAGYAYGVSFSPDGRRVATGTADRTVRLWDVTDPAHPRQIGEPLTGPGNTVFGLGHSHDGRFLAAASGDGSVRVWDVHDPAHPVPWATLHGGLTATVWTAVFSPDGSRLAAAGADGWVDMWTVDPEAAATAVCANAGDAVTPAEWARFLPDTPYRNPC*