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cn_combo_scaffold_4785_3

Organism: CN-SCN_Pseudonocardia_86x

partial RP 15 / 55 MC: 1 BSCG 14 / 51 MC: 2 ASCG 7 / 38 MC: 1
Location: 600..1640

Top 3 Functional Annotations

Value Algorithm Source
DNA polymerase LigD, polymerase domain protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CPI4_PSEUX similarity UNIREF
DB: UNIREF100
  • Identity: 92.2
  • Coverage: 346.0
  • Bit_score: 661
  • Evalue 3.50e-187
DNA polymerase LigD, polymerase domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 92.2
  • Coverage: 346.0
  • Bit_score: 661
  • Evalue 9.90e-188
DNA polymerase LigD, polymerase domain protein {ECO:0000313|EMBL:AEA25101.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonoc similarity UNIPROT
DB: UniProtKB
  • Identity: 92.2
  • Coverage: 346.0
  • Bit_score: 661
  • Evalue 4.90e-187

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Taxonomy

Pseudonocardia dioxanivorans → Pseudonocardia → Pseudonocardiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1041
ATGGCGGCCAAGACCGTGGTGCTGTTGACCGTGCCGGGGCCCGAGGGCGACCGGGAGGTGCGTCTGACGAGCCCGGACAAGGTGTACTTCCCGGAGCGGGGGATCACGAAGCGGCAGGTCGTCGAGTACTACCTGGCCGTCGCGGAGCCGATGACGCGAGTCCTGATGGACCGGCCGACGAACCTGAAGCGCTACCCCGACGGCGTCGACGGGGAACCGTTCTTCGCGAAGCGGCTGCCGAAGGGTGCGCCGGAGTGGGTGCGGACGGCGCAGGTGACGTTCCCGAGCGGTCGCAAGGCGGACACGTTCGCGCCGTCGGAGCCGGCGGCGATCGCGTGGGCGGCGAACATGGGCACGCTGGACTTCCACCCGTGGCCGGTGCGGGCGGCCGACACGGACCGTCCCGACGAGCTGCGAATCGACCTGGACCCGCAGCCGGGCACGGACTTCGCCGACGCCGTGAAGGTGGCGGCGGTGCTGCACGAGGTGCTGGGTGAGGCGGGCCTGGTGGGCTGGCCGAAGACGTCGGGCGGGCGGGGCATCCACGTGTTCGCCCGGATCCGGCCGGAGTGGTCGTTCATCGAGGTGCGGCGGGCGGTGATCGCGATCGCGCGCAAGGTGTGCGAGCGCATCCCGGAGCAGGCGACGGTGGACTGGTGGAAGGAGGAGCGCGGCGAACGCGTCTTCCTCGACTACAACCAGGCGGCGCGGGACCGGACGATCGCGTCGGCATGGTCGGTGCGGGGGCTGCCGCGGGCGACGGTGTCGATGCCGGTGACGTGGGAGACGCTGCCCGACGTCGCACCCGAGGACTTCGACGTGCTGACGGTTCCGGCGCTGCTGGAGCGTGACGGCGACGCGCACGCCGGCATGGACGACGCGGTCGGCGGGATCGAGGCGGCGCTGGAGTGGTTCGCCGCCGACGAGCGCGACCGCGGGCTGGGGGAGCTGCCCTATCCGCCGGAGTATCCGAAGATGCCGGGCGAGCCGATGCGGGTGCAGCCGTCGCGGGCGCGGGCAGGGAAGGACACCGCCGGCTGA
PROTEIN sequence
Length: 347
MAAKTVVLLTVPGPEGDREVRLTSPDKVYFPERGITKRQVVEYYLAVAEPMTRVLMDRPTNLKRYPDGVDGEPFFAKRLPKGAPEWVRTAQVTFPSGRKADTFAPSEPAAIAWAANMGTLDFHPWPVRAADTDRPDELRIDLDPQPGTDFADAVKVAAVLHEVLGEAGLVGWPKTSGGRGIHVFARIRPEWSFIEVRRAVIAIARKVCERIPEQATVDWWKEERGERVFLDYNQAARDRTIASAWSVRGLPRATVSMPVTWETLPDVAPEDFDVLTVPALLERDGDAHAGMDDAVGGIEAALEWFAADERDRGLGELPYPPEYPKMPGEPMRVQPSRARAGKDTAG*