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cn_combo_scaffold_4897_10

Organism: CN-SCN_Pseudonocardia_86x

partial RP 15 / 55 MC: 1 BSCG 14 / 51 MC: 2 ASCG 7 / 38 MC: 1
Location: comp(8352..8921)

Top 3 Functional Annotations

Value Algorithm Source
Regulatory protein TetR n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CUY4_PSEUX similarity UNIREF
DB: UNIREF100
  • Identity: 65.1
  • Coverage: 189.0
  • Bit_score: 242
  • Evalue 4.80e-61
TetR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 64.6
  • Coverage: 189.0
  • Bit_score: 240
  • Evalue 3.90e-61
Regulatory protein TetR {ECO:0000313|EMBL:AEA27453.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (st similarity UNIPROT
DB: UniProtKB
  • Identity: 64.6
  • Coverage: 189.0
  • Bit_score: 240
  • Evalue 1.90e-60

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Taxonomy

Pseudonocardia dioxanivorans → Pseudonocardia → Pseudonocardiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 570
GTGGCACGTACAGCCCAGGCCGGCGCGCACGACCGCATCCTCGACGCCGCCTCCGCGCTCTTCTACGCGCACGGGATCGGCGCCGTCGGGACCGCACAGGTCGTCGAGGCCGCCGGGTGCGGGAAGAATCTGCTCTACACGCACTTCCCGAGCAAGGGCGATCTCGTCGCCGCCTACCTCCACCGCTTCCGCGCCACCCGCGAGGCCTCGCTCGAGGCCGCCCTCGCCGGAGCCGGCGACGACCCCGCCCGGCAGCTCGTCGCCCTCGTCCGAGAGGTCGCCGACCGCGTCGCCGGGCCCTCCTACCGCGGCTGCGCGCTCCGCAACTTCCTCGCCGAGGCACCCGACGTCGGCGACGCCGCCGACTCCGTCGCACGGGCATACCTGGCCGCGGGCCGGGACCGGATCGCGACGCTCGTCGCCCGGCTCGACGTCCCCGACCCCGACGGCCTGTCCGACCGGATCGGGCTCGTCGTCGAGGGGCTGTACGCCAGCGGGCCCGACCCCCGGAGGGCCGAGCTGGGTGACGCCGCCGTCGCCCTGGTCCGGGACCTCGTGAAGGCGGGGTGA
PROTEIN sequence
Length: 190
VARTAQAGAHDRILDAASALFYAHGIGAVGTAQVVEAAGCGKNLLYTHFPSKGDLVAAYLHRFRATREASLEAALAGAGDDPARQLVALVREVADRVAGPSYRGCALRNFLAEAPDVGDAADSVARAYLAAGRDRIATLVARLDVPDPDGLSDRIGLVVEGLYASGPDPRRAELGDAAVALVRDLVKAG*