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cn_combo_scaffold_5234_1

Organism: CN-SCN_Pseudonocardia_86x

partial RP 15 / 55 MC: 1 BSCG 14 / 51 MC: 2 ASCG 7 / 38 MC: 1
Location: comp(1..711)

Top 3 Functional Annotations

Value Algorithm Source
ABC-type transporter, periplasmic subunit n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CNP3_PSEUX similarity UNIREF
DB: UNIREF100
  • Identity: 82.7
  • Coverage: 237.0
  • Bit_score: 402
  • Evalue 2.60e-109
ABC transporter substrate-binding protein similarity KEGG
DB: KEGG
  • Identity: 82.3
  • Coverage: 237.0
  • Bit_score: 401
  • Evalue 2.20e-109
ABC-type transporter, periplasmic subunit {ECO:0000313|EMBL:AEA22356.1}; Flags: Precursor;; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" sou similarity UNIPROT
DB: UniProtKB
  • Identity: 82.3
  • Coverage: 237.0
  • Bit_score: 401
  • Evalue 1.10e-108

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Taxonomy

Pseudonocardia dioxanivorans → Pseudonocardia → Pseudonocardiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 711
GTGCCCGTCTCCCGCCGTTCGTTCCTCGCCGGCGTCGCCGGCGCGGGTGCAGTCGCCGCCACGCTGGCGGCCTGCGGCACCGGCGGCGGCGGTGGGAGCGGCTCGGGTGAGCGCGGCGGCCGGCTGCGCGCCGCGTTCGTTGCGGGCGGGTCCACGGAGACGCTCGACCCGGCCAAGCTGCCGCAGTTCGTCGACCAGTCCCGGGCCAAGGCGTGCTTCGACACGCTGGGCCGCTGGGAGCAGGACATGTCGTGCACGCCGCGGCTGGCCGAGTCGTGGGAGGCCGACGCCACCGGCACCCGCTGGCGCATCACGCTCAAGGACGCGAAGTTCCACGACGGCCGTCCGGTCCGCTCGGCCGACGTGCTCTACACCTACCGCCGCGTCGCCGACCCGGCCACGACCGCGAGCGCCGCCGCGCTGTTCAGCAAGGTCGACTTCACCGCCAGCCGCGCGATCAACGACCGCGAGCTCGAGATCGTCCTCGGCGCCCCGAACTTCCTGTTCCCGGTCGCGCTCGGCGCGCTCGGCAGCGAGATCGTCCCCGAGGGAACCACGAACTTCGCCGCCCCCATCGGGTCCGGCCCGTTCAAGTTCGTGTCGTTCACCCCCGGCGGCCCGGCCCTGTACAAGCGCAACGACGCCTACTGGGACGGCGCCCCGCTGCTCGACGAGCTCGAGTTCGTCCCGATCGCCGACGAGAGCGCCCGC
PROTEIN sequence
Length: 237
VPVSRRSFLAGVAGAGAVAATLAACGTGGGGGSGSGERGGRLRAAFVAGGSTETLDPAKLPQFVDQSRAKACFDTLGRWEQDMSCTPRLAESWEADATGTRWRITLKDAKFHDGRPVRSADVLYTYRRVADPATTASAAALFSKVDFTASRAINDRELEIVLGAPNFLFPVALGALGSEIVPEGTTNFAAPIGSGPFKFVSFTPGGPALYKRNDAYWDGAPLLDELEFVPIADESAR