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cn_combo_scaffold_5298_11

Organism: CN-SCN_Pseudonocardia_86x

partial RP 15 / 55 MC: 1 BSCG 14 / 51 MC: 2 ASCG 7 / 38 MC: 1
Location: comp(12200..14587)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Nocardiopsis synnemataformans RepID=UPI0003478F1A similarity UNIREF
DB: UNIREF100
  • Identity: 50.0
  • Coverage: 796.0
  • Bit_score: 747
  • Evalue 1.90e-212
Integrase family protein {ECO:0000313|EMBL:EFC83497.1}; TaxID=102897 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. EUN1f.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 48.9
  • Coverage: 809.0
  • Bit_score: 738
  • Evalue 7.30e-210
Integrase family protein similarity KEGG
DB: KEGG
  • Identity: 50.8
  • Coverage: 748.0
  • Bit_score: 669
  • Evalue 1.10e-189

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Taxonomy

Frankia sp. EUN1f → Frankia → Frankiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 2388
ATGAGAACGACCGCACCCGAGATCATCACCGGTTCCGAAGTGAGTGGAGCTGCGGCACTGGTCAGGGCGCCCCTGCGGCGAGGCGCCGCGGATGAGGCCGGGGTCGAGGAGGTCCTGGCCCGCATCGAGGCGTTGCCGGTCTGGGTCGACTGGTCACCTGAACGTCGTCGCCAGACGCTGCGGGTCGCGCACCGCATCCTGATCGGGCTGCAGGCCTTTCCCGGGACGGGCTGGGCGCAGCGGTGGGAGAACGCGGGTCTCGAGGACGGGCGGCACTGGCCCGAGGTGCTCTGCGGGCTCGGTGTCGAGGCGTCAGCTCGCCGGACCGGCCGCAAGCCGGCCAAGCAGGGTCTGATGGGGCTTCTGCTGGTGGGGACGGTGCTGCCCGGCTACGACTTCCTGGCCGCGTTCCGACTGGCGAGTCATTGGTTCGGCGAGGTGCGCACGGTGCTGGCGCCCGCGACGTTCGCCCGGCTTGCCGAGCGGGCCACCGAGCTCGGGATGGCCGACCCGACGCGGGACCGGGCCATGCTGGCACTGGTCAAGATCGTGCTCCACACCGGACTCGACCCGGCCGACTTCACGGTCGCCGAGTTCGACGAGCTGCACGTCGCAGCGAATCGTCTCTCCGCACGCACTCCCAGCGGAGCGGTGCCGGCCTGGGATCTACTGCGCGGCCTGGGGATCCCGGCCGGACTGAACTACCGCGAACACCAGCGGGTCGGGCAGCAGAGCACCGTCGAGATGGTCGATCGCTACGGGCTGCGACCCGGGCGGGTCCGCGACGTGCTGGTCCGCTACCTCGACGAACGTCGTCCCGGACTGGACTTCAAGAGCTTCCGCAACATGGTCGGTCACCTGGCCGGCGCGTTCTGGGCCGACATCGAGGCCCACCACCCCGAGATCGAGACCCTCGCCCTGCCCGACGAGGTCGCCGCGGCCTGGAAACAGCGACTGCACTACACCCGCCGCTCCGGTGTCCCGACCCGCCCGCGCCGCGACTACCTCCAGCACCTGATGCAGGTCCGGGCGTTCTATCTCGACATCGCCGAGTGGGCCCAGCAGGACCCGACCTGGGCCGAGCACGCTGTCGCCTGCCCGATCCGCCGCGCCGAGACCCAAGGAGTGGCCAAGCAGCGCCACCGCACCATCGCCGCGGTCCACCAGCGCATCCGGGAACGCCTGCCCCGCCTGCCGCTGCTGGTCGACACCGCCCATCGTCACCACCGCGACCGGGCGCAGCTGATGGCCGTGACACAAGCGGCCGCGATCGGGGACGAGTTCACCCACGACGGACACCGCTACCGGCGCACCGCCCGCCAGCGACCCGGCGCCGAGGACAACCAGCCCGCTTCCGCTCGGGCCGAGGACCTGGCCACCGGTCAGACCCACGACCTGATCACTGAGGAAGACGACGCGTTCTGGTCCTGGGCGGTGATCGAGGTGCTGCGCCACACCGGAGTGCGCCTGGAAGAACTGCTCGAGCTCACCCACCTGGCCCTGGTCCAGCACCGCCTCGACGACACCGGCGAGATCGTCCCGCTGCTGCAGATCCTGCCCTCCAAGACCGACCAGGAACGGCTGCTGCTGGTCAGCCCGGAGCTGGCCAGCGTCCTGGCCATCATCATCAACCGGCTGCGCGCCATCGGTGACGGCGCCATCCCGGTCATCCCGCGCTGGGACCGGCACGAACGCCTCTACGCGCCCGCGCTGCCCTACCTGTTCCAGCGCCGCAGCGGACACCGCCACCGGGTCATCGGGGTCAGTGCAGTGCAGAACCTGCTCAACCGCACCCTGACCCGGGCCGGCCTCAGCGACGCCGCCGGCGACCCACTCAATTTCACCCCTCACGACTTCCGGCGCATCTTCGCCACCGAAGCTGTCACCGGCGGACTACCCGTCCACATCACCGCGCGCCTACTCGGTCATACCCGTATCGCCAGCAGCGAATCCTATATCGCGGTCTACCAGAACGAACTGATCCGCACCTACCGGTCCTATCTTTCCGAGCGGCGGGCCACCCGCCCCGAAGCCGAATACCACGAACCCACCGATGACGAGTGGCGCGAGTTCCAGCAACACTTCGCTCTGCGCAAGCTCGAACTCGGCACCTGTGCACGACCCTACGGCAGCCCCTGCCAGCACGAACACGCGTGCGTCCGCTGCCCCATGCTGCGCGTCGACCCCCGCCAACGCGACCGACTCGCCGAGATCGCCGACAGCCTCCGTGAACGAATCAGCGAGGCCCGGGACAACGGCTGGCACGGCGAAATCGAAGGACTCCGCATCAGCCTACGCGGCGCCGAAAGCAAACTCGTCGTCCTCGACCGTCAAACCCGGAACACGTCGACATACCTCGGCATCCCGGATCTCACTCCAAAGGACTAA
PROTEIN sequence
Length: 796
MRTTAPEIITGSEVSGAAALVRAPLRRGAADEAGVEEVLARIEALPVWVDWSPERRRQTLRVAHRILIGLQAFPGTGWAQRWENAGLEDGRHWPEVLCGLGVEASARRTGRKPAKQGLMGLLLVGTVLPGYDFLAAFRLASHWFGEVRTVLAPATFARLAERATELGMADPTRDRAMLALVKIVLHTGLDPADFTVAEFDELHVAANRLSARTPSGAVPAWDLLRGLGIPAGLNYREHQRVGQQSTVEMVDRYGLRPGRVRDVLVRYLDERRPGLDFKSFRNMVGHLAGAFWADIEAHHPEIETLALPDEVAAAWKQRLHYTRRSGVPTRPRRDYLQHLMQVRAFYLDIAEWAQQDPTWAEHAVACPIRRAETQGVAKQRHRTIAAVHQRIRERLPRLPLLVDTAHRHHRDRAQLMAVTQAAAIGDEFTHDGHRYRRTARQRPGAEDNQPASARAEDLATGQTHDLITEEDDAFWSWAVIEVLRHTGVRLEELLELTHLALVQHRLDDTGEIVPLLQILPSKTDQERLLLVSPELASVLAIIINRLRAIGDGAIPVIPRWDRHERLYAPALPYLFQRRSGHRHRVIGVSAVQNLLNRTLTRAGLSDAAGDPLNFTPHDFRRIFATEAVTGGLPVHITARLLGHTRIASSESYIAVYQNELIRTYRSYLSERRATRPEAEYHEPTDDEWREFQQHFALRKLELGTCARPYGSPCQHEHACVRCPMLRVDPRQRDRLAEIADSLRERISEARDNGWHGEIEGLRISLRGAESKLVVLDRQTRNTSTYLGIPDLTPKD*