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cn_combo_scaffold_5391_14

Organism: CN-SCN_Pseudonocardia_86x

partial RP 15 / 55 MC: 1 BSCG 14 / 51 MC: 2 ASCG 7 / 38 MC: 1
Location: comp(14497..15387)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Actinomycetospora chiangmaiensis RepID=UPI00037CCFF3 similarity UNIREF
DB: UNIREF100
  • Identity: 75.4
  • Coverage: 301.0
  • Bit_score: 458
  • Evalue 3.90e-126
ABC transporter permease similarity KEGG
DB: KEGG
  • Identity: 78.3
  • Coverage: 304.0
  • Bit_score: 453
  • Evalue 6.00e-125
  • rbh
ABC-type transporter, integral membrane subunit {ECO:0000313|EMBL:AEA24579.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudono similarity UNIPROT
DB: UniProtKB
  • Identity: 78.3
  • Coverage: 304.0
  • Bit_score: 453
  • Evalue 3.00e-124

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Taxonomy

Pseudonocardia dioxanivorans → Pseudonocardia → Pseudonocardiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 891
GTGACCGAACTGCTCGTACGGGAGATCGCGACGGGACCGGACGCCCCACCCGCACCCGTGCCCGGCCGGCGCCGGCTCGGCCGGTTCCTGCTGCACCGCCCCGGGCTCGTCGTCGCGGTCCTGATCGTGCTCACCGTGCTGGTCGCCGCGTTCGCGCCGCACCTGCTCGCGCCGGGTGACCCGTCGGCCGGCGTGCCCGCCCAGAAGCTGCGCCCACCCGGACCGGGGCACTGGTTCGGCACCGACTACCTCGGCCGCGACATCTGGACCCGCGTCGTGCACGGCGCGGCGCTGTCGTTGCAGGCCACGGTGATCGCCGTCGCGGTCGCGCTCGTCGCGGGCGGGCTGGTCGGGCTGCTGGCCGGGTTCGTCCGCGGCTGGGTCGACGAGGCGCTGATGCGGATCGTCGACGTCCTGATGGCCATCCCGGCGATCCTGCTGTCGCTCGCGCTGATCACCGCGCTCGGCTACGGCACGCTCAACGTCGCGATCGCGGTGGGTGTCGCGAGCGTCGCCAACTTCGCCCGCGTCATGCGGTCGGAGACACTGCGGATCCGGCAGTCGGTGTACGTCGAGGCGGCGCGGGCCGTCGGCACCCGGTGGTACGTGACGCTGCGCCGCCACGTCCTGCCCAACGCCGCGGGCCCGGTCGCCGTGCTGGCCGTGCTGGAGTTCGGGCTGGCCATCCTCGCGATCTCGTCGCTGAGCTTCCTCGGCTTCGGCGCCCCGCCACCGGCTCCGGAGTGGGGGTCGCTGATCGCGGAGGGCCGCAACTACCTGGCGACGTCGTGGTGGCTGTGCGCCATGCCCGGCCTGACCATCGCCGCGACCGTGCTGTCGGTCAACCGCATCTCCCGGGCCCTCGACGGCGAATGGGCGGCGGCCCGATGA
PROTEIN sequence
Length: 297
VTELLVREIATGPDAPPAPVPGRRRLGRFLLHRPGLVVAVLIVLTVLVAAFAPHLLAPGDPSAGVPAQKLRPPGPGHWFGTDYLGRDIWTRVVHGAALSLQATVIAVAVALVAGGLVGLLAGFVRGWVDEALMRIVDVLMAIPAILLSLALITALGYGTLNVAIAVGVASVANFARVMRSETLRIRQSVYVEAARAVGTRWYVTLRRHVLPNAAGPVAVLAVLEFGLAILAISSLSFLGFGAPPPAPEWGSLIAEGRNYLATSWWLCAMPGLTIAATVLSVNRISRALDGEWAAAR*