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cn_combo_scaffold_5391_16

Organism: CN-SCN_Pseudonocardia_86x

partial RP 15 / 55 MC: 1 BSCG 14 / 51 MC: 2 ASCG 7 / 38 MC: 1
Location: comp(16340..17980)

Top 3 Functional Annotations

Value Algorithm Source
ABC-type transporter, periplasmic subunit n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CUB8_PSEUX similarity UNIREF
DB: UNIREF100
  • Identity: 69.2
  • Coverage: 530.0
  • Bit_score: 725
  • Evalue 4.10e-206
ABC transporter substrate-binding protein similarity KEGG
DB: KEGG
  • Identity: 69.2
  • Coverage: 530.0
  • Bit_score: 725
  • Evalue 1.20e-206
ABC-type transporter, periplasmic subunit {ECO:0000313|EMBL:AEA24577.1}; Flags: Precursor;; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" sou similarity UNIPROT
DB: UniProtKB
  • Identity: 69.2
  • Coverage: 530.0
  • Bit_score: 725
  • Evalue 5.70e-206

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Taxonomy

Pseudonocardia dioxanivorans → Pseudonocardia → Pseudonocardiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1641
ATGCGCTCGACCCTCCTCGCCGGTCCCCGGCGTGGCCACGGCGGCCTGCGCGCCGCTGCCGCGGCCCTGACCGCCTCCGCCGCGCTGCTGCTGGCGGCGTGCGGTTCCGGCGCCGCGACCGGACCCGGCGCCGACGCCGGCCCGCCCACCCCCGGTGGCACGCTGCGCTTCGCCGTGTCCAGCGACCAGGGCTGCCTCGACCCCCAGCAGGTCACCAGCAACGACTCGGTCTACTCGGTGCGCCAGCTCGTCGACTCCCTCACCGACCAGGATCCGGCCACCGGCGAGATCAAGCCCTGGCTCGCGACGACATGGACGGTCTCGCCGGACGCGACGTCCTACTCGTTCACGCTGCGTCCCGGGGTCACGTTCAGCGACGGCACCCCGCTCGACGCGAACGTCGTGAAGGCCAACTTCGACGCCGTGCCGAAGCTCGGGGTTCGGGCGTCGCTGGCCAAGGGCTACCTCGCGGGTTACACCGGCACGACCGTCACCGGGCCGGACACGTTCACGGTGGGCTTCTCCTCGCCCAACGTGCAGTTCCTGCAGGCGACGTCGACCCACAGCCTGGGCATCCTCTCGGCCGCGACGGTCGCGAAGACCGACGACGAGCGGTGCGCCTCGGCGATCGGATCGGGCCCGTTCACCGTCGGGAGCTACACCAAGAACCAGTCGACGATCCTGGTCAAGCGGCCCGGCTACGCGTGGGGGTCGTCGCTGTTCGCCCACCCCGGCGAGGCCTACCTCGACAAGCTGGAGTTCCGGGTCGTTCCCGAGTCCGGGGTCCGCACCGGCTCGCTGCAGGCCAACGAGGTCGACGCCATCACCAGCATCGGCCAGCAGGACGAGGCGCCCCTGACCGCCGCAGGCGCACAGCTGCTCGCCCGGGCCAACCCCGGGCTGCCGTTCCAGATCGCGTTCAACCTGTCCAAGCCGATCGTCTCCGACCCGGCCGTGCGGACCGCGCTGTCGCTGTCGATCAACCGGCCCGAGGTCGTCTCGGCGATCTACACCTCCCAGACCAAGCCGGCGACCAGCGCGCTCGCGTCGAGCACACCCGACTACACCGACCAGGCCGGGCAGCTCGGGTTCGACCTCGCGAAGGCGCAGCAGGGCCTCGACGCCGCCGGGTGGACCCCCGGCCCGGACGGCATCCGCGTCAAGGACGGGCAGCGCCTGACCATCCCCGTCGTCTACGCCAACAACCTCGGCAGCGTGAAGCCGACGCTGGAGCTGCTGCAGCAGCAGGCCAAGGCCGCCGGCATCGACCTGCAGCTGCTCGAGAAGCAGATCTCCGACGTGGCGGCGCTCCAGCAGAGCGGCGACTTCTCCGCGCTGTGGTTCAACCTCACCCGGGCCGACCCCGACATCCTGCGCAGCCAGTACTGGAGTGGCGGGGTGAACCTTCTGCGGTTCCCGCCGAGCCCGCTCGACCAACTGCTCACCGCGCAGGCGTCGGCGGCCGACCCGGCCACCCGGACCGCGCTCGTCGCCGACGCCCAGCGCGACCTGCTGGCCCAGCACCTCGTCGTCCCCGTCGTCGAGCTGACCACGGTCCTGGCGGTGGCGCCCACCACCCACGGCGTCACCTTCGACGCGTCGTCGCGCATTCAGCTCCACGACGCCTGGAAGTCGCAGTGA
PROTEIN sequence
Length: 547
MRSTLLAGPRRGHGGLRAAAAALTASAALLLAACGSGAATGPGADAGPPTPGGTLRFAVSSDQGCLDPQQVTSNDSVYSVRQLVDSLTDQDPATGEIKPWLATTWTVSPDATSYSFTLRPGVTFSDGTPLDANVVKANFDAVPKLGVRASLAKGYLAGYTGTTVTGPDTFTVGFSSPNVQFLQATSTHSLGILSAATVAKTDDERCASAIGSGPFTVGSYTKNQSTILVKRPGYAWGSSLFAHPGEAYLDKLEFRVVPESGVRTGSLQANEVDAITSIGQQDEAPLTAAGAQLLARANPGLPFQIAFNLSKPIVSDPAVRTALSLSINRPEVVSAIYTSQTKPATSALASSTPDYTDQAGQLGFDLAKAQQGLDAAGWTPGPDGIRVKDGQRLTIPVVYANNLGSVKPTLELLQQQAKAAGIDLQLLEKQISDVAALQQSGDFSALWFNLTRADPDILRSQYWSGGVNLLRFPPSPLDQLLTAQASAADPATRTALVADAQRDLLAQHLVVPVVELTTVLAVAPTTHGVTFDASSRIQLHDAWKSQ*