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cn_combo_scaffold_5534_6

Organism: CN-SCN_Pseudonocardia_86x

partial RP 15 / 55 MC: 1 BSCG 14 / 51 MC: 2 ASCG 7 / 38 MC: 1
Location: comp(5047..5955)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, TrmB n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CZX9_PSEUX similarity UNIREF
DB: UNIREF100
  • Identity: 87.8
  • Coverage: 303.0
  • Bit_score: 519
  • Evalue 3.20e-144
transcriptional regulator TrmB similarity KEGG
DB: KEGG
  • Identity: 87.8
  • Coverage: 303.0
  • Bit_score: 519
  • Evalue 9.10e-145
  • rbh
Transcriptional regulator, TrmB {ECO:0000313|EMBL:AEA24812.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivo similarity UNIPROT
DB: UniProtKB
  • Identity: 87.8
  • Coverage: 303.0
  • Bit_score: 519
  • Evalue 4.50e-144

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Taxonomy

Pseudonocardia dioxanivorans → Pseudonocardia → Pseudonocardiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 909
ATGACGGTCCCCGACGGAGTCGTCGCCCAGCTCCAGGAGCTGGGCATGTCGATGTACGAGGCGAAGGCCTACCTCGCCCTCGTCGCGGCAGGAGAGCCGCTCAACGGCTACGAGGTCGCCAAGCGTTCCGGGGTGCCGCGCAGCACCGTCTACGAGACGCTCGGCAAGCTCACCGCCAGCGGCGCGACCTACGAGGTCCGCACCCACGACGACACCGTCACCTACCTGCCGCTGCCGCCCGCGTCGCTGATCGACAGGCTCGGCCGCCGCTACGAGTCGACGCTCGGCGCCCTGCGCGCCGCGCTGCCGTCGATCGCACCGCCCTCGCGGGTGCACCTGATCCACAACCTCACCGGCCGCGACGCACTGCTCGAACGGGCGGGCGACGTCGTGGCGGGGGCCCGGCACGACCTGTTCCTGTCGACGTGGCCGCAGGAGAACGCCGTGCTCGACGGCCTGGTACGTGACGCCGACGGCCGCGGCGTCGCCGTCACGACGCTGACCTACGGTGTGGGGGAGGACATCCCCGGGCACACCTACGAGCACCGGTTCTCACCGCCCGAGGTCGTCCTGGAGAACCTGGGCTGCCGGCTGTTCGTCGCCGTTGCCGACCGCCGCGAGTGCGTCATCGGCGGGTTCGTCGACTCCGACGCGTGGGGGATCTTCTCCGACAACCCCGCCGTCGTCATGGTCGCCGTGGAGTACGTCCGCCACGACATCGCGATGCAGCTCATGGCCGGGCACTTCCCGGCGGCCGACGTCGCGAGCTTCTGGAACGGCGACGAGGACGTCGCCCGGCTGCGGTCCGACCACGGCTTCGCCGCCAGCGCCCTGCGCGCCGGGGGCACCGACGGGGAACGTCCTGCCGGCCCGCGCCGCGGCGGCCGCCGCCGGGGCCGCAGCGCCTGA
PROTEIN sequence
Length: 303
MTVPDGVVAQLQELGMSMYEAKAYLALVAAGEPLNGYEVAKRSGVPRSTVYETLGKLTASGATYEVRTHDDTVTYLPLPPASLIDRLGRRYESTLGALRAALPSIAPPSRVHLIHNLTGRDALLERAGDVVAGARHDLFLSTWPQENAVLDGLVRDADGRGVAVTTLTYGVGEDIPGHTYEHRFSPPEVVLENLGCRLFVAVADRRECVIGGFVDSDAWGIFSDNPAVVMVAVEYVRHDIAMQLMAGHFPAADVASFWNGDEDVARLRSDHGFAASALRAGGTDGERPAGPRRGGRRRGRSA*