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cn_combo_scaffold_5544_1

Organism: CN-SCN_Pseudonocardia_86x

partial RP 15 / 55 MC: 1 BSCG 14 / 51 MC: 2 ASCG 7 / 38 MC: 1
Location: 2..547

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L17 n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CWB2_PSEUX similarity UNIREF
DB: UNIREF100
  • Identity: 83.0
  • Coverage: 188.0
  • Bit_score: 307
  • Evalue 1.20e-80
50S ribosomal protein L17 similarity KEGG
DB: KEGG
  • Identity: 83.0
  • Coverage: 188.0
  • Bit_score: 307
  • Evalue 3.20e-81
50S ribosomal protein L17 {ECO:0000256|HAMAP-Rule:MF_01368, ECO:0000256|RuleBase:RU000661}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" sou similarity UNIPROT
DB: UniProtKB
  • Identity: 83.0
  • Coverage: 188.0
  • Bit_score: 307
  • Evalue 1.60e-80

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Taxonomy

Pseudonocardia dioxanivorans → Pseudonocardia → Pseudonocardiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 546
CTGCACAACATCCGGCAGATCGCCAAGGTGATCCGGGACAAGGACGTCATCCACCGTCTCGTCACCGACATCGGCCCGTTCTTCGCCGACCGCAACGGTGGCTACACCCGCATCACCAAGACGATGCCGCGCAAGGGCGACAACGCCCCCATGGCGGTCATCGAGCTGGTGTCGCAGAAGACGGTCACCGACGAGGCCGAGCGTGCCCGTCGTGTCGCCGCGTCGCAGCAGGTGGCGGAGGACAAGGCGGCCAAGGCGCAGCCGGTCGCCGACGTCCCCGCGGCCGAGGAGACCGACACCGCGGCGCCGTACGGCGAGGGCAGCCACGCCCCGCTGGACGACCCGCAGGAGGCCCCCGAGGGCTTCGACATCAAGGGCAACGCGGACTCGATGCTGTACCACCTGCCCGGGACGTCGTTCTACGACCGCACCGTGGCGGAGGTCTGGTTCGCGACGGCCGAGGCTGCCGAGGCCGCCGGCTTCGCGCTGCCGAAGTCGCAGCAGGAGGCCGCCTCCGAGGAGTCGGCCGAGGGCGACGAGGCCTGA
PROTEIN sequence
Length: 182
LHNIRQIAKVIRDKDVIHRLVTDIGPFFADRNGGYTRITKTMPRKGDNAPMAVIELVSQKTVTDEAERARRVAASQQVAEDKAAKAQPVADVPAAEETDTAAPYGEGSHAPLDDPQEAPEGFDIKGNADSMLYHLPGTSFYDRTVAEVWFATAEAAEAAGFALPKSQQEAASEESAEGDEA*