ggKbase home page

cn_combo_scaffold_5544_2

Organism: CN-SCN_Pseudonocardia_86x

partial RP 15 / 55 MC: 1 BSCG 14 / 51 MC: 2 ASCG 7 / 38 MC: 1
Location: 604..1413

Top 3 Functional Annotations

Value Algorithm Source
tRNA pseudouridine synthase A (EC:5.4.99.12) similarity KEGG
DB: KEGG
  • Identity: 87.1
  • Coverage: 263.0
  • Bit_score: 468
  • Evalue 1.30e-129
  • rbh
tRNA pseudouridine synthase A {ECO:0000256|HAMAP-Rule:MF_00171}; EC=5.4.99.12 {ECO:0000256|HAMAP-Rule:MF_00171};; tRNA pseudouridine(38-40) synthase {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA pseudouridy similarity UNIPROT
DB: UniProtKB
  • Identity: 87.1
  • Coverage: 263.0
  • Bit_score: 468
  • Evalue 6.20e-129
tRNA pseudouridine synthase A n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CWB1_PSEUX similarity UNIREF
DB: UNIREF100
  • Identity: 87.1
  • Coverage: 263.0
  • Bit_score: 468
  • Evalue 4.40e-129

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Pseudonocardia dioxanivorans → Pseudonocardia → Pseudonocardiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 810
GTGCCCGTTGCTCCCACACTGCGGTACCGGCTCGACATCTCCTACGACGGCACGGACTTCTCCGGCTGGGCCCCGCAGCCCTCGCAGCGCACGGTGTGCGGCGAGATCGCTGATGCGCTGCACCGGATCCTGCGGACGCCGGTGGCGCTGACCGTCGCCGGGCGCACCGACGCGGGGGTGCACGCGAGCGGCCAGGTGGCCCACGTGGACCTTGCCCTCGACGTCGAGCCCGACCGGCTCGTGCGCCGGCTCGCGCGCCTGCTCCCGCCCGATGTCCGGGTGCGTGACGTGACGGTCGTGCCGCCGGAGTTCGACGCCCGCTTCTCCGCGCTGCGCCGCCACTACGTCTACCGGGTCACCACGGCGCCCTGGGGCGCGGACCCGTTGCGCGCCAGGGACACCCTGGCGTGGCCGCACCCGATCGACCTCGACGCCGTCGCCCACGCCTCCGCGGGGCTGCTCGGCGAGCACGACTTCGCGGCCTTCTGCAGACGCCGCGAGGGCGCGACGACCATCCGCGACCTGCTGCGCTTCGACTGGTCCCGCGACGCCGACGGCGTTCTGCGCGCGGAGCTCTCCGCCGACGCGTTCTGCCACAGCATGGTGCGCAGCCTGATCGGCGCGATGCTCGACGTCGGCAGGGGCCGGCGCGGCGTCGACTGGCCGGCGGGTCTGCTGGAGCGCACCGAGCGCGTCTCCGACGTCGCCGTCGCGCCGGCGCACGGGCTGACCCTGGTGCGGGTCGACTACCCGGCCGACGACGAGCTCGCCGCCCGCGCGGCCGTCACGCGCAACGTCCGCACCCGCTGA
PROTEIN sequence
Length: 270
VPVAPTLRYRLDISYDGTDFSGWAPQPSQRTVCGEIADALHRILRTPVALTVAGRTDAGVHASGQVAHVDLALDVEPDRLVRRLARLLPPDVRVRDVTVVPPEFDARFSALRRHYVYRVTTAPWGADPLRARDTLAWPHPIDLDAVAHASAGLLGEHDFAAFCRRREGATTIRDLLRFDWSRDADGVLRAELSADAFCHSMVRSLIGAMLDVGRGRRGVDWPAGLLERTERVSDVAVAPAHGLTLVRVDYPADDELAARAAVTRNVRTR*