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cn_combo_scaffold_5544_5

Organism: CN-SCN_Pseudonocardia_86x

partial RP 15 / 55 MC: 1 BSCG 14 / 51 MC: 2 ASCG 7 / 38 MC: 1
Location: 3286..3960

Top 3 Functional Annotations

Value Algorithm Source
Two component transcriptional regulator, LuxR family n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CWA8_PSEUX similarity UNIREF
DB: UNIREF100
  • Identity: 91.1
  • Coverage: 224.0
  • Bit_score: 387
  • Evalue 1.10e-104
LuxR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 91.1
  • Coverage: 224.0
  • Bit_score: 387
  • Evalue 3.10e-105
  • rbh
Two component transcriptional regulator, LuxR family {ECO:0000313|EMBL:AEA27526.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pse similarity UNIPROT
DB: UniProtKB
  • Identity: 91.1
  • Coverage: 224.0
  • Bit_score: 387
  • Evalue 1.50e-104

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Taxonomy

Pseudonocardia dioxanivorans → Pseudonocardia → Pseudonocardiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 675
ATGACCGTCCGCGTCCTGCTGGCCGACGACCAGGCGCTGGTCCGCGCCGGCTTCCGCGCGCTGCTCGACGCCCAGCCCGACGTGTCCGTCGTCGCCGAGGCCGCGGACGGGCGGGAGGCGGTGCGCCTCGCCGGGGCGGAGAAGCCCGACGTCGTCCTCATGGACATCCGCATGCCGGTCATGGACGGCCTCGCGGCGACGCGGGAGATCGCGTCGGACCCCGGGCTCGCGGGCGTGCACGTCGTGGTGCTGACGACGTTCGCCGAGGACGAGTACGTCTTCGACGCCATCCGGTCCGGGGCGAGCGGGTTCCTCGTGAAGGACACCGAGCCCGCGGAGCTGGTCCACGCCGTGCGGGTCGTCGCGGGCGGGGACGCCCTGCTGTCGCCGGGCGTGACGCGGCGGCTGATCGAGGAGTTCGCGGTCCGGTCGTCGCCCGCGGGCACGACGGCCACCGCGGCGCTGGCGGTGCTCACCGATCGCGAACGCGAGGTCGTCGCGCTCGTCGCGGGCGGGCTGACCAACGACGACATCGCCGAGCGGCTCGTCGTGAGCCCGGCGACGGCGAAGACGCACGTCAGCAGGGCCATGGGCAAGCTCGGCTGCCGCGACCGGGCACAGCTCGTGGTGCTCGCCTACGAGAGCGGGCTGGTGCGCCCGGGCTGGGCCGGCTGA
PROTEIN sequence
Length: 225
MTVRVLLADDQALVRAGFRALLDAQPDVSVVAEAADGREAVRLAGAEKPDVVLMDIRMPVMDGLAATREIASDPGLAGVHVVVLTTFAEDEYVFDAIRSGASGFLVKDTEPAELVHAVRVVAGGDALLSPGVTRRLIEEFAVRSSPAGTTATAALAVLTDREREVVALVAGGLTNDDIAERLVVSPATAKTHVSRAMGKLGCRDRAQLVVLAYESGLVRPGWAG*