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cn_combo_scaffold_5593_5

Organism: CN-SCN_Pseudonocardia_86x

partial RP 15 / 55 MC: 1 BSCG 14 / 51 MC: 2 ASCG 7 / 38 MC: 1
Location: comp(3130..3852)

Top 3 Functional Annotations

Value Algorithm Source
LuxR family transcriptional regulator n=1 Tax=Pseudonocardia sp. P1 RepID=UPI0001FFDB6E similarity UNIREF
DB: UNIREF100
  • Identity: 83.6
  • Coverage: 220.0
  • Bit_score: 351
  • Evalue 5.40e-94
DNA-binding response regulator similarity KEGG
DB: KEGG
  • Identity: 68.5
  • Coverage: 213.0
  • Bit_score: 280
  • Evalue 4.30e-73
DNA-binding response regulator {ECO:0000313|EMBL:AJW39997.1}; TaxID=1564114 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus sp. B7740.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 68.5
  • Coverage: 213.0
  • Bit_score: 280
  • Evalue 2.10e-72

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Taxonomy

Rhodococcus sp. B7740 → Rhodococcus → Corynebacteriales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 723
ATGAACCTCAGGACCGGCGTGCCGACGGGCACCCGCGACGTCACCGGCCTCGTCCGGCGGCCGCAGGGGCAACGGCCCCGCAGCGCGGTCGTGCGGGTCGTGCTCGTCGACGACCACGCGATCATGCGCCAGGGCCTGCGGGCGATTCTGGAACGCGAGGGCGACCTGCAGGTCGTCGGCGAGGCCGGCACCCCCGACGAGGCGATCGCCGTCGTCGCCGGGGCGCGCCCGCACGTCGTCGTCCTCGACCTCAAGCTCACCTCGGGCCCGCAGACCGACGGTCTGCAGGTGTGCCGGCGGCTGTGCGAGACCCACCCCGGCATCGGTGTCCTGGTGCTGACGACGTTCGCCGAGGACCGGCTCGTCGTCGAGTCCGTGCAGGCCGGGGCACGCGGGTACGTCGTGAAGGACGTCGACACCACCGAGCTGGTCCGCGCAATCCGGGCCGTCGCCCGCGGAGAGAGCGCCTTCGACGCCCACAGCGCGTCGGCGATGGTGCGGTCGCTCTCGGGCGGGGGACAGCAGGACCGGGAGCGACTCACCGAACGCGAGCTCGACGTCCTGCGCCTGCTCGCCCGGGGCCTGTCCAACCGCGCGATCGGCGCCCAGCTCTACATCTCGGAGACGACGGTGAAGTTCCACGTCGGCAACCTGATGCGCAAGCTGATGGTCTCCCGCCGCGCCGAGGCCGTCTACGCGGCGACGAAGCTCGGGCTCCTCTAG
PROTEIN sequence
Length: 241
MNLRTGVPTGTRDVTGLVRRPQGQRPRSAVVRVVLVDDHAIMRQGLRAILEREGDLQVVGEAGTPDEAIAVVAGARPHVVVLDLKLTSGPQTDGLQVCRRLCETHPGIGVLVLTTFAEDRLVVESVQAGARGYVVKDVDTTELVRAIRAVARGESAFDAHSASAMVRSLSGGGQQDRERLTERELDVLRLLARGLSNRAIGAQLYISETTVKFHVGNLMRKLMVSRRAEAVYAATKLGLL*