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cn_combo_scaffold_5804_5

Organism: CN-SCN_Pseudonocardia_86x

partial RP 15 / 55 MC: 1 BSCG 14 / 51 MC: 2 ASCG 7 / 38 MC: 1
Location: comp(4190..5176)

Top 3 Functional Annotations

Value Algorithm Source
Putative iron-siderophore ABC transporter,substrate-binding protein n=1 Tax=Clavibacter michiganensis subsp. michiganensis (strain NCPPB 382) RepID=A5CV79_CLAM3 similarity UNIREF
DB: UNIREF100
  • Identity: 37.5
  • Coverage: 341.0
  • Bit_score: 183
  • Evalue 4.50e-43
ABC transporter substrate-binding protein {ECO:0000313|EMBL:AII09908.1}; TaxID=37919 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus opacus (Noca similarity UNIPROT
DB: UniProtKB
  • Identity: 38.3
  • Coverage: 332.0
  • Bit_score: 190
  • Evalue 4.00e-45
fecB2; putative iron-siderophore ABC transportersubstrate-binding protein similarity KEGG
DB: KEGG
  • Identity: 37.5
  • Coverage: 341.0
  • Bit_score: 183
  • Evalue 1.30e-43

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Taxonomy

Rhodococcus opacus → Rhodococcus → Corynebacteriales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 987
ATGAGGCGTACGAGATCGAGTCTGGCCGCGGTCGTACTGACGGCGGCACTGACCGCCGCGATGGCGGTCGCGGGATGCGGTGCGGGGAGCCCACCGCAGGCCGAGTCGCCGCCGGGCGGCTCCGCCGGGCAGATCGTCGTCGAGCACACCCTCGGGACGACGACGCTGCCGAAGAGGCCTGAGCGGGTCGTCACGCTGACCGACCGCGACACCGACACAGCGCTCGCCCTCGGGGTCGTGCCGGTCGGAATCCGGACCCTCTACGGGTTCGACTCCGGGGCCGGACCGTGGTCGCAGGACCGGCTCGGCGGGGCGACACCGACGGTGTGGAAGTCCCGCGAGCTCAACTTCGAGGGCATCGCGGCGTTGCGGCCCGACCTGATCGTCAACGCGAACGGGGACGCCGACCGCACCGTCTATGACCGGTTGTCCGCGATCGCGCCCACGATCGGGCTCCCCAAGGGGCAGGTCCCCTACGGCGCGAGCACCGAGAGCACGACGCTCCTCGTGGCGCAGGCGCTGGGGCTACCGGAGCAGGGGCGCCGGCTCGTCGACGACCTGCAGGACTTCCTGCGCTCCCAGGCCGCCGCGCACCCGGAGTTCTCCAGAGTGACGGCGTCGTACCTGGACGTCCACAGCAGCGGAATCCTCGCGTATCCGCAGGGCCATCTCATCAACCGCGTCCTCACCGACCTCGGGTTCGGGATGCCGGACATGGTGCGGGCCATCCCGGCCGGCACCAAGTCGTTCGACGTCTCACCCGAGTCCGTGGCCGGCTACGCGGGGCAGGTCATGGTCGTCTACCCCTACGACCGCACCCTCGCCGACATCGAGCGGCAGGTCCCCACGTTCGCGGCCCTCGACGCCGTCCGGGAGGGCCGCGTCGTCCTGCTGACCGACCAGTCGTTCAGCGCGGCGTCGGTGCTGTCGCTGCGCTACGGGGTGGACCGGCTCGTCCCGGAGATCGCGCGGTCGCTTCAGACGTGA
PROTEIN sequence
Length: 329
MRRTRSSLAAVVLTAALTAAMAVAGCGAGSPPQAESPPGGSAGQIVVEHTLGTTTLPKRPERVVTLTDRDTDTALALGVVPVGIRTLYGFDSGAGPWSQDRLGGATPTVWKSRELNFEGIAALRPDLIVNANGDADRTVYDRLSAIAPTIGLPKGQVPYGASTESTTLLVAQALGLPEQGRRLVDDLQDFLRSQAAAHPEFSRVTASYLDVHSSGILAYPQGHLINRVLTDLGFGMPDMVRAIPAGTKSFDVSPESVAGYAGQVMVVYPYDRTLADIERQVPTFAALDAVREGRVVLLTDQSFSAASVLSLRYGVDRLVPEIARSLQT*