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cn_combo_scaffold_5804_6

Organism: CN-SCN_Pseudonocardia_86x

partial RP 15 / 55 MC: 1 BSCG 14 / 51 MC: 2 ASCG 7 / 38 MC: 1
Location: 5300..6823

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Frankia sp. BMG5.12 RepID=UPI000378BFC0 similarity UNIREF
DB: UNIREF100
  • Identity: 41.3
  • Coverage: 523.0
  • Bit_score: 372
  • Evalue 8.10e-100
AraC family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 40.6
  • Coverage: 508.0
  • Bit_score: 366
  • Evalue 1.60e-98
  • rbh
Transcriptional regulator, AraC family {ECO:0000313|EMBL:ABW12454.1}; TaxID=298653 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. (strain EAN1pec).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 40.6
  • Coverage: 508.0
  • Bit_score: 366
  • Evalue 8.20e-98

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Taxonomy

Frankia sp. EAN1pec → Frankia → Frankiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1524
GTGCCTGGCCGGGCGCCGGGCGTCCCCGCGTCCCGGCTCGACGCCGGTTGGGGCACGGGTCAGCACCTGGTGCTGTGGGTCCACACCGGATCGGCGACGGTCGAGCTCGCCCACGGCGACGTCCGCCGGCTCGGACGCGACCACGGCATCTGGATCCCCGCCGGGTGCACGCACCGGGTCGTGACGGTCGATGCCGGGTCACTGGCGTTCCCGTTGCTCGTCCCGCCGGACGCGACGGATGCGGCCCCCACCCACGCCGTCGTCTTCGCGATCCCCGACGGGTGGCGGGACTGGCTCGTCCAGCAGCACCTGCACCGGGTCGCGCCGGTCATCGGCTTCGGTCACCGTGCGGCCGCGCTGCTCTCCCTCCTCGGCCCCGGGACGCGTGAGTCGCCGCGCGCGGCGCCACCGGCGAACACCCCGCCGCGACTCGCGGTCCCGGTGCCCCGGTCGCCCGCCGCCGGGCGCGTCGCCCGCGAGCTGCTGCGCGATCCGTCCATCGGGCTGACCGTCGAGCAGTGGGCGACGAGGGTGTCCTCCAGCCCACGGTCGCTGCGGCGGGACTTCGCCGACGGGACCGGCACGACGTTCGCCGAGTGGCGGACCCGGGTCCGGGTGGGCGCCGCGACCGATCTGCTGGCGGCGGGCCATCCCGTTGCGGCTGTCGCGGTGCGGTGCGGGTTCGCCGGCCGCGGTGGGCTCGCCCGCGCGTTCCGGGCCGTCCACGGGACGAGCCCCGCGGCGTTTCGCCGGACCGCGGCCGACGCCGCGCCGCCCGGGCCGGGCGGGCCGACCGAGCGGGGCGCCGGGCCGACGGAACCGCGGCAGGTCACGACCACTTGGACCGCTCCCCGGGTCAACGACTTCCACGTCCTGATCTGGGTGTACCGCGGCTCCGCGCACGCACGTGTCGCCGACACCCGGTACGACCTCGCGCGCGGGGACGCGATCTGGCTGCCTGCGGGCGTCGTCAACCAGACCGGTTCACCCGAGGACGCCATCGGCATCCCCGTCGGCGACGTCCCCGGCCACGCCGTCATGTTCGACGGGCCGCTGCGGGCCCGGTTCCCGCGCAGCTGGGACGTCTTCCTGCTGCACTGTTCGGTCGCTGCCTATACCGGCCTGAAGCCCGAGTACCACGACCAGCGGCGGATTCTCGACGTCTTCACCGACCGGTTCGCCGCCCAGCAGGCGCGGGCCCTGCCGATGCCCACCGACCCGGCCGCCCTCGACGCCGCGCGCGACGTCCTGCGCGCGATCGCGTCGTCGTCACCGGGCAACGCCGCCCGGCGTGGTGGCAGCACGCTCGACGCCGTGTTTCGTCGCGAGACCGGGCTGTCCTTCCGCGGTTGGCAGCACGCCGCCCGGATGCGTGCGGCGGCCGACATGATCGAGCGCGGGCTCTCGCCGTCCGCCGTCGCGCACCGGGTCGGTTACGCGCACCTCTCGAACTTCAGCCGGGCATTCCGACGGTTCCACGGCGCCCCGGCGCGGGAGGTCCGGGTCAGCCGAGCAGGGGCATGA
PROTEIN sequence
Length: 508
VPGRAPGVPASRLDAGWGTGQHLVLWVHTGSATVELAHGDVRRLGRDHGIWIPAGCTHRVVTVDAGSLAFPLLVPPDATDAAPTHAVVFAIPDGWRDWLVQQHLHRVAPVIGFGHRAAALLSLLGPGTRESPRAAPPANTPPRLAVPVPRSPAAGRVARELLRDPSIGLTVEQWATRVSSSPRSLRRDFADGTGTTFAEWRTRVRVGAATDLLAAGHPVAAVAVRCGFAGRGGLARAFRAVHGTSPAAFRRTAADAAPPGPGGPTERGAGPTEPRQVTTTWTAPRVNDFHVLIWVYRGSAHARVADTRYDLARGDAIWLPAGVVNQTGSPEDAIGIPVGDVPGHAVMFDGPLRARFPRSWDVFLLHCSVAAYTGLKPEYHDQRRILDVFTDRFAAQQARALPMPTDPAALDAARDVLRAIASSSPGNAARRGGSTLDAVFRRETGLSFRGWQHAARMRAAADMIERGLSPSAVAHRVGYAHLSNFSRAFRRFHGAPAREVRVSRAGA*