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cn_combo_scaffold_5956_10

Organism: CN-SCN_Pseudonocardia_86x

partial RP 15 / 55 MC: 1 BSCG 14 / 51 MC: 2 ASCG 7 / 38 MC: 1
Location: comp(9442..10650)

Top 3 Functional Annotations

Value Algorithm Source
Cell envelope-related transcriptional attenuator n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CN03_PSEUX similarity UNIREF
DB: UNIREF100
  • Identity: 81.4
  • Coverage: 414.0
  • Bit_score: 634
  • Evalue 5.30e-179
cell envelope-related transcriptional attenuator similarity KEGG
DB: KEGG
  • Identity: 81.6
  • Coverage: 414.0
  • Bit_score: 636
  • Evalue 6.80e-180
Cell envelope-related transcriptional attenuator {ECO:0000313|EMBL:AEA26016.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudon similarity UNIPROT
DB: UniProtKB
  • Identity: 81.6
  • Coverage: 414.0
  • Bit_score: 636
  • Evalue 3.40e-179

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Taxonomy

Pseudonocardia dioxanivorans → Pseudonocardia → Pseudonocardiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1209
GTGCTGGTCACCGTCTTCTCACTCGTCGTGCTCACCGCGGCCGGCTACGGCTGGTCGACGTTCCGCGCGCTCGCGGGCTCGATCGTCACCAGCGACGTCCTGAGTGGCAGCACACCCCGGACGGGCCCGCCGTCGCGGACGATCACCGCGCTGGTCGTGGGCGTCGACAGTCGGACCGATGCGCAGGGGCGGCCGTTGCCGCAGGACGTGCTCGACAAGATGCACGCCGGTCCCGACGACGGGCAGCTCAACACCGACACGATCATCCTGCTGCGCATCCCGGCCGACCCCGCCAAACCCGTTGTGGCCGTGTCGTTCCCACGTGACTCGTACGTGAAGCTCGCGGGCGACTACGGCACCCACAAGATCAATTCTGCGTACGGCAGGGCGGTCACGTCCACGACCCGCACGCTGCAGGAGCAGGGCCTCGACGCCGACACCGTCCGCAGGCAGGCGTTCGAGGCCGGCCGCAAGGCGCTCGTCGCGACCGTCACCCAGCTGACGGGGATCGTCGTCGACCACTACGCGGAGATCAACCTCGCCGGGTTCGTCGAGCTCACCGACGCGATCGGCGGCGTCCCCGTGTGCCTCACCGAGCCCGTCGACGACGCCCGGTACTCCGGCGCCGTGCTGCCCGCCGGTCCGCAGACCCTCGACGGCGCGAACGCGCTGGCCTTCGTGCGCCAGCGCCACGGCCTGGAGGGCGGCGACCTCGACCGGATCACCCGCCAGCAGGCCTACATGGCCGGGCTCGCGAACACGCTGCTCGGTGGGGGCAGGCTCGCCGACCCGGCGACGGTGCAGCGGCTCCTCGGGATCGTCAGCCGCTACGTGGTGCTCGACCAGGGCTGGGACCTCGACCAGCTCGTCGGGCAGGTGCGGCAGGTGTCGGCGTCGAAGGTCGAGTTCCACACGATCCCGACGATCCGCCCCGACCTCTACACGCCCTACGACGGCGTCGCGGTGGAGATCGACGACGACGCGGTGCGGACGTTCGTGCGCTCGACCCTCGACGGGCTGCCCGTGCCGACGACGAGCGCGTCGGCGAGCGGGACCCGGACCGGCCTGCCGACGACCAGCTCCGCGCCGCGGACGACCACCCCGCGCACCACGGCGCCCCTCACGTCGAACCCGACGTCGGCTCCCGGCACGCCGACGACCACCGAGCCGCAGCCGATCACCGGCGCGACGGTCCCCTGCGTGAGCTGA
PROTEIN sequence
Length: 403
VLVTVFSLVVLTAAGYGWSTFRALAGSIVTSDVLSGSTPRTGPPSRTITALVVGVDSRTDAQGRPLPQDVLDKMHAGPDDGQLNTDTIILLRIPADPAKPVVAVSFPRDSYVKLAGDYGTHKINSAYGRAVTSTTRTLQEQGLDADTVRRQAFEAGRKALVATVTQLTGIVVDHYAEINLAGFVELTDAIGGVPVCLTEPVDDARYSGAVLPAGPQTLDGANALAFVRQRHGLEGGDLDRITRQQAYMAGLANTLLGGGRLADPATVQRLLGIVSRYVVLDQGWDLDQLVGQVRQVSASKVEFHTIPTIRPDLYTPYDGVAVEIDDDAVRTFVRSTLDGLPVPTTSASASGTRTGLPTTSSAPRTTTPRTTAPLTSNPTSAPGTPTTTEPQPITGATVPCVS*