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cn_combo_scaffold_6165_14

Organism: CN-SCN_Pseudonocardia_86x

partial RP 15 / 55 MC: 1 BSCG 14 / 51 MC: 2 ASCG 7 / 38 MC: 1
Location: comp(9859..10242)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, HxlR family n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CUI2_PSEUX similarity UNIREF
DB: UNIREF100
  • Identity: 75.6
  • Coverage: 131.0
  • Bit_score: 187
  • Evalue 9.40e-45
HxlR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 75.6
  • Coverage: 131.0
  • Bit_score: 187
  • Evalue 2.60e-45
Transcriptional regulator, HxlR family {ECO:0000313|EMBL:AEA25372.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia di similarity UNIPROT
DB: UniProtKB
  • Identity: 75.6
  • Coverage: 131.0
  • Bit_score: 187
  • Evalue 1.30e-44

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Taxonomy

Pseudonocardia dioxanivorans → Pseudonocardia → Pseudonocardiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 384
ATGGCCGACCATCCGGGCATCGCCGCCACCCCGACCGCCGCAGCGGCGGTGGCTGCCTGCGTGCGCGTCGACGCCGCCCTGGCGCGGGCGTTCGCGTTCCTGGGCAAGCGCTGGAACGCCGTGCTGCTGCGGGCGTTGCAGAGCGGGCCCGCGGGATTCCGCGAGCTCGCCCGCGAGGTGCGTGGGATCAGCGACTCGGTGCTCTCGGACCGGCTCGCCGACCTCGCCGGGGCCGGGCTGATCGCGCGCACCGTGAGTGCGGGGCCACCTGTCTCGGTGTCCTACGCCCTCACCGCGCGCGGCGAGGCGCTGATGCCGGCGCTCGCCCAGATCTCCGAGTGGGCGCAGGAACACCTGCCGCCGGACCCCGACGCTCCCTGCTGA
PROTEIN sequence
Length: 128
MADHPGIAATPTAAAAVAACVRVDAALARAFAFLGKRWNAVLLRALQSGPAGFRELAREVRGISDSVLSDRLADLAGAGLIARTVSAGPPVSVSYALTARGEALMPALAQISEWAQEHLPPDPDAPC*