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cn_combo_scaffold_6521_3

Organism: CN-SCN_Pseudonocardia_86x

partial RP 15 / 55 MC: 1 BSCG 14 / 51 MC: 2 ASCG 7 / 38 MC: 1
Location: comp(909..1154)

Top 3 Functional Annotations

Value Algorithm Source
30S ribosomal protein S18 n=1 Tax=Pseudonocardia sp. P1 RepID=UPI0001FFDD7A similarity UNIREF
DB: UNIREF100
  • Identity: 78.8
  • Coverage: 80.0
  • Bit_score: 125
  • Evalue 2.80e-26
30S ribosomal protein S18 similarity KEGG
DB: KEGG
  • Identity: 76.3
  • Coverage: 76.0
  • Bit_score: 116
  • Evalue 4.80e-24
30S ribosomal protein S18 {ECO:0000256|HAMAP-Rule:MF_00270}; TaxID=1292037 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis vancoresmyci similarity UNIPROT
DB: UniProtKB
  • Identity: 72.8
  • Coverage: 81.0
  • Bit_score: 116
  • Evalue 1.40e-23

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Taxonomy

Amycolatopsis vancoresmycina → Amycolatopsis → Pseudonocardiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 246
ATGCCCGCCCCCGCCCGCCGCCCGCGTCCGCCGCGGCGCAAGGCCAACCCGCTGCACGCCCGCGGCATCGAGGAGGTCGACTGGAAGGACACCGCTCTCCTGCGGACGTTCGTCTCCGACCGCGGCAAGATCCGCGCCCGCCGCGTCACCGGGCTGACCCCGCGCCAGCAGCGGCAGGTGGCCGTCGCCATCAAGAACGCCCGGGAGATGGCGCTGCTGCCCTACGCCGGCGCCGGGCGGGGGTGA
PROTEIN sequence
Length: 82
MPAPARRPRPPRRKANPLHARGIEEVDWKDTALLRTFVSDRGKIRARRVTGLTPRQQRQVAVAIKNAREMALLPYAGAGRG*