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cn_combo_scaffold_6521_8

Organism: CN-SCN_Pseudonocardia_86x

partial RP 15 / 55 MC: 1 BSCG 14 / 51 MC: 2 ASCG 7 / 38 MC: 1
Location: 3212..6241

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, LuxR family n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CXM2_PSEUX similarity UNIREF
DB: UNIREF100
  • Identity: 80.8
  • Coverage: 999.99
  • Bit_score: 1571
  • Evalue 0.0
Transcriptional regulator, LuxR family {ECO:0000313|EMBL:AEA27605.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia di similarity UNIPROT
DB: UniProtKB
  • Identity: 80.8
  • Coverage: 999.99
  • Bit_score: 1571
  • Evalue 0.0
LuxR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 80.8
  • Coverage: 999.99
  • Bit_score: 1571
  • Evalue 0.0

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Taxonomy

Pseudonocardia dioxanivorans → Pseudonocardia → Pseudonocardiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 3030
ATGAGCGACGTGCCGCGGCTGGGCGTCGGGATCCCGCTGGTCGGCCGCCGTGACGAGCTGCGCGCGCTGTCCGCCGCGCTCGACGCGGCCGCCGCCGGGTCGGCCGGTGCCGTCCTGCTGGCGGGAGAGGCCGGCGTCGGCAAGACGCGGCTGATCGCCGAGACCGTCGCACACGCCCACTCCGCGGGGTTCGCCGTGCTCACCGGCCGCTGCCTCGACACGGGCGAGGCCACGCTGCCGTACCTGCCGTTCACCGAGGCGCTGCGCGGCCTGGCCGCCGAGCGTCCGGATCTCGTCGACGCCCACCCGCCGCTGCACCGGCTGCTGCCGGGGTCGCGGCCGCGCGAGGAGGTCAGCGCGGGCGAGCGCGACCTCGGGCAGCTGCGCGTGTTCGACGCGGTGCTGTCGGTCCTGGAGCAGCGGTCGGCGCAGCACCCGGTGCTGCTGGTGCTGGAGGACGTGCACTGGGCCGACACGTCGAGCCGTGACCTGCTGGTGTTCCTCGCCTCCCGGCTGGGGACGCAGCGGCTGCTGGTGCTGGCGAGCTACCGCGGCGACGACCTGCACCGGCGGCATCCGTTGCGCCCCTTGCTCGCCGAGCTGGTGCGGCTGCCCGCGGTGACCCGCGTCGACCTGGGTGCGCTCGGCCCGGCCGACGCCGAGGCGCTCGTGCGGGAACTGGCCGACGGCGCGCTGTCCGACCAGGCGATCGCCCGGATCGCGCGGCGCAGCGAGGGCAACGCGTTCTTCGCCGAGGAGCTGGTGTCGGCCTCCGACGAGGGGGTGCCCGATGGGCTGGCCGAGGTGCTGCTGGCCCGGCTCGACCGGCTCACCCCGGACGCGCGCCGGGTGCTGCGGGCGGCGTCGGTGGCGGGGCGCCGGGTCCGGCACGACCGGCTGGCCGCGGTGCTCGACATGGGTGTCGACGAGCTGGAGACCGCGCTGCGTGCCGCCGTCGCCCACCACGTCCTCGTGCCGGAGCCGGGTGGCCGGTCGGTCACCGCGTCCGACACCTACGTGTTCCGGCACGCCCTGCTGCACGAGGCCGTCTACCAGGACCTGCTCCCCGGGGAGCGCAGCCGGCTGCACGCGGCGTTCGCGGCGCTGCTCTCCCCCGGCGGCGCCGGCGACCGGGAGGAGCCGGGAGCCGTCGCCGAACTCGCCCACCACGCGCTCGCGGCGCACGACCTGCCGCTGGCGTTGTCGGCATCGGTGCGCGCGGCCGACGAGGCCGACCGGCGCGGCGGCCCGGCCGAGGTGCTGCTGCACGCCGAGCGAGCGCTGAGCCTGTGGCCCGCGGTGCCCGACGCGCACGAGGTCACGGGTGTCACCGAGATCACGATCACCCGGTGGGCGGCGTGGGCGGCCGCGGCCACGGGCGACCCCGACCGTGGGGTGGCGCTCGCCCACCGCGCGGTGGAGCTGGCCGACCGTGGGGACGATCCGGTCCTGGCCGCCGACCTGCGGGTCCGGTACGCGTTGCGACTGCTGGAGATGGGCGAAGGCGAGGAACCGCGCCGTGTCGTGGCCGATGCGCTGGCCGTGTACGCCGACGCCCCGCCATCCGGCGACCTGGCGTGGGCGTACGCCGTCGCCGCCCGGTCGGCGATGCGGCTCGACGACATCGCCGAGGCCGGCGCCCGCGCGTACACGGCGCTGCAGGTGGCGCGCGAGGTCGTCGAGCGCGCGCCGGAGAGCCACGACGACGACGCGGTCGCCGCGCAGGCCGACGCGCTGGTGACGCTGTCGGTGTGCGAGGAGGCGCTGGGCCGCGACGAGGCGGCCCGCAGCCGGCTGGCCGAGGCCAAGGGGCTCGCACGGGCGTCGGGCAACCTCGGCGTCGAGCTGCGGACCTTCTACAACACCGGAATCTCCCTGCTCGACGCCGGCCGGCTCGCCGAGGCGGTCGCCGAGTTCGCCGCGGGCGAGGAGCGGGCCGGCGCCACGGGCACGACGTGGAGCAGCTACGGCCTGGAGCTGCGGGTGGCGCACGTGCTGGCCGCGCACATGCGTGGCGACTGGGACGACGCCGAACGCTCGGCCCGGATGGGCGCGGTGGCGGTGTCGCAGACGGTGGCCACGCGGGTGGCCGCGGCGGCGCTGCTCACCGCGATGGGCCGGGGCCGGTTCGACGCCGTGGAGCGCCGCATCGACGACCTGCTGGCGGGCCGGCCCACCGACGACCAGGTGCTGCTGATGATCGGCCAGGCGGGCGCGGAGTCGGCGTTGTGGCGCGGGGACCCGCGGCGGGCGCTGGAACGCATCGCCGCGGCACGTGAGGAGCTGGCGGCCTGGGACCCGCACCATCTGGCCGGAATCATGCTGTGCGCCATCGGGGTCGCCGCGTACGCCGATCTGGCGGCCACGGGCACGCTGGACCGTGCCGACGTCGTGAAGGGCGCCGAGGAGCTGGCCGCCGCCGGCCGGGAGGCGGCCGAGAAGGGCACGCCGCGGGGTGCGCACCTGGGCGTCGAGGGCCTGGCGTGGCTGGCGCGGATCGCGGCGGAGCTGGCCCGCGCGCGGGGCGACGCCGACGCCCCGGACCTGTGGGCCGAGGTCGTCGTGGCGTTCGGCTACGGCGACGGGTACCGGCAGGCGCTGGCGCGTCGTCGGCGGGCGGAGGCGTTGCTCGCGGCCGACTCGACCAAGGCCGACTCAACCAAGGCCGACGCGACCGCCGACGCCCGCGCCGAGGCCGCCGACGAGCTGCGCTGCGCTCTCGCCACCGCCACCGAGCTGGGCGCGAGCCCGCTGGCGGCGGCGGTGCGCGACCTGGCCGACCGCGCCGGGATCATCCTGGACGGCCGCCGGGAGCCGGTGCGCGACGTCCTCACCCCGCGCGAGCACGCCGTCCTGGAGCTGGTCGCGGGCGGGCGGACCAACCGGCAGGTCGGCGCCGAGCTGTTCATCAGCGAGAAGACCGTCAGCGTCCACCTGTCGCGGGTGATGGCCAAGCTGGGCGCCGCGAGCCGCACCGAGGCGGTGTCGCTGGCCTGGTCACGGGGTCTGCTCGACGCCACCGGGTCGTGA
PROTEIN sequence
Length: 1010
MSDVPRLGVGIPLVGRRDELRALSAALDAAAAGSAGAVLLAGEAGVGKTRLIAETVAHAHSAGFAVLTGRCLDTGEATLPYLPFTEALRGLAAERPDLVDAHPPLHRLLPGSRPREEVSAGERDLGQLRVFDAVLSVLEQRSAQHPVLLVLEDVHWADTSSRDLLVFLASRLGTQRLLVLASYRGDDLHRRHPLRPLLAELVRLPAVTRVDLGALGPADAEALVRELADGALSDQAIARIARRSEGNAFFAEELVSASDEGVPDGLAEVLLARLDRLTPDARRVLRAASVAGRRVRHDRLAAVLDMGVDELETALRAAVAHHVLVPEPGGRSVTASDTYVFRHALLHEAVYQDLLPGERSRLHAAFAALLSPGGAGDREEPGAVAELAHHALAAHDLPLALSASVRAADEADRRGGPAEVLLHAERALSLWPAVPDAHEVTGVTEITITRWAAWAAAATGDPDRGVALAHRAVELADRGDDPVLAADLRVRYALRLLEMGEGEEPRRVVADALAVYADAPPSGDLAWAYAVAARSAMRLDDIAEAGARAYTALQVAREVVERAPESHDDDAVAAQADALVTLSVCEEALGRDEAARSRLAEAKGLARASGNLGVELRTFYNTGISLLDAGRLAEAVAEFAAGEERAGATGTTWSSYGLELRVAHVLAAHMRGDWDDAERSARMGAVAVSQTVATRVAAAALLTAMGRGRFDAVERRIDDLLAGRPTDDQVLLMIGQAGAESALWRGDPRRALERIAAAREELAAWDPHHLAGIMLCAIGVAAYADLAATGTLDRADVVKGAEELAAAGREAAEKGTPRGAHLGVEGLAWLARIAAELARARGDADAPDLWAEVVVAFGYGDGYRQALARRRRAEALLAADSTKADSTKADATADARAEAADELRCALATATELGASPLAAAVRDLADRAGIILDGRREPVRDVLTPREHAVLELVAGGRTNRQVGAELFISEKTVSVHLSRVMAKLGAASRTEAVSLAWSRGLLDATGS*