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cn_combo_scaffold_6532_10

Organism: CN-SCN_Pseudonocardia_86x

partial RP 15 / 55 MC: 1 BSCG 14 / 51 MC: 2 ASCG 7 / 38 MC: 1
Location: comp(8375..9037)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, AraC family n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CZM2_PSEUX similarity UNIREF
DB: UNIREF100
  • Identity: 79.5
  • Coverage: 176.0
  • Bit_score: 282
  • Evalue 4.80e-73
AraC family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 80.1
  • Coverage: 176.0
  • Bit_score: 283
  • Evalue 6.10e-74
Transcriptional regulator, AraC family {ECO:0000313|EMBL:AEA26694.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia di similarity UNIPROT
DB: UniProtKB
  • Identity: 80.1
  • Coverage: 176.0
  • Bit_score: 283
  • Evalue 3.00e-73

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Taxonomy

Pseudonocardia dioxanivorans → Pseudonocardia → Pseudonocardiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 663
GTGCTGTACCTGGAACCCGACGTCCTCGGCGAGGACGGCATCGGCGCCGCCGTCGACCACCCCGCCCTCGACGACCGCCTCCTGCGGCTGCGCATCTCCCAGCTGCACCAGACCCTCGGGGCGCCGGGGGAGGAGCTCGCCGCGCAGAGCCGGCTCACCCTGGTCCGCGACCGGTTGCGGGCACACCTCGCCGGCCGGGTCGAGGCAGCGTCGCCGGTCCGTGACCCGGGCCTCGCCGCCCGGCTGCGCGACCTCCTCGACGCCTCCCTGCCCGCCGGCATCTCCCTCGACGAGGCCTCGCGGATCCTGGGCGCCGCGCCCAGCCACCTGGTGCGCGCCTTCGGGTCCGCCTACGGTCTGCCCCCGCACCGCTACCTCACCGGCCGACGCATCGACGACGCCCGCCGGCTCCTGCTCGACGGGATGGCGCCCGCCGAGGTCGCCGGTGCGGCGGGGTTCTACGACCAGGCGCACCTGACCCGGCACTTCCGCCGGATGCTCGGCACCACGCCCGGCCGCTACCGCGCCGCCCCCCGAAGCGCCCCGCCTCCCGGCGCCGAGTTCGAGACGTCGTACTGGTTCGATCATGGCCCGGACAGCCCGGTGTCGAGCTCGGCGGGAGCCCGTCAGCCCTCGACGACGCCCAGGACGAAACCGTCGTAG
PROTEIN sequence
Length: 221
VLYLEPDVLGEDGIGAAVDHPALDDRLLRLRISQLHQTLGAPGEELAAQSRLTLVRDRLRAHLAGRVEAASPVRDPGLAARLRDLLDASLPAGISLDEASRILGAAPSHLVRAFGSAYGLPPHRYLTGRRIDDARRLLLDGMAPAEVAGAAGFYDQAHLTRHFRRMLGTTPGRYRAAPRSAPPPGAEFETSYWFDHGPDSPVSSSAGARQPSTTPRTKPS*