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cn_combo_scaffold_6798_5

Organism: CN-SCN_Pseudonocardia_86x

partial RP 15 / 55 MC: 1 BSCG 14 / 51 MC: 2 ASCG 7 / 38 MC: 1
Location: comp(4380..5183)

Top 3 Functional Annotations

Value Algorithm Source
Type II secretion system F domain protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CIS9_PSEUX similarity UNIREF
DB: UNIREF100
  • Identity: 71.7
  • Coverage: 269.0
  • Bit_score: 367
  • Evalue 1.40e-98
type II secretion system F domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 71.4
  • Coverage: 269.0
  • Bit_score: 365
  • Evalue 1.10e-98
  • rbh
Type II secretion system F domain protein {ECO:0000313|EMBL:AEA22674.1}; Flags: Precursor;; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" sou similarity UNIPROT
DB: UniProtKB
  • Identity: 71.4
  • Coverage: 269.0
  • Bit_score: 365
  • Evalue 5.60e-98

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Taxonomy

Pseudonocardia dioxanivorans → Pseudonocardia → Pseudonocardiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 804
GTGGTGAGCGCCGCCCTCGCCGCGCTGGCCGCGGCCGTCCTCATCGCTCCCCAGCGGCCCGCGGCGGCCCGGCTGCGGCACGTCACCGGTGCCGCGGCCGGGTCTCGGCGGCTCCCCCGGCCGACTGTCGGCCTGGGCGTCGTCCTCGGCGCGACCATCGGGGCGGGGCTCGTCGCGGGTGTCGGCGGCGCGCTGGCCGGGCTGCTCGCCGGCACGATCTGGGTGCGCCGCCGCGCCGCCCGGCGGGCCGGGATCGCCGCGGCCGTCGCCGGGACCGAGCTCGCCGACGCCCTCACCCGCATCTGCGACGAGCTGCGTGCCGGCGCCCACCCTGCCGCCGCGCTCTCGGGGATCGACGCCGACGGCACCACCGCCCGCGCGGCCCTGCGCCCCGCCGAGGCCGCGCTGCGCCTCGGCGAGACCGTCCCCGCCGCCCTCGCCCGCTCCACCCCGCACCCCGCCCTCACCGAGGACGTCGACCGCGTCGCCGCGGCCTGGGCGCTGTCCGACCGGCACGGCATCCCGCTCGCGACCCTGCTGTCGTCGGTCGCCACCGACGTCCGCTGGCGCGTCGAGTTCGGCAACCGGGTCCGCGCCGAGCTCGCCGGACCGCGCGCCACCGCGACCGTGCTGACGCTGCTGCCCGCGCTGGGCCTCGGATTCGGGCAGCTCATGGGTGCCGACCCCATCGGCGTGCTGCGCGACGGCGTCCTCGGCGCGGTCCTGCTCGTCGGCGGGACCCTGCTGACGGCCGCCGGCATCGCGTGGTCCGAACGCATCCTCGCCGCAGCGGTTCCCCGATGA
PROTEIN sequence
Length: 268
VVSAALAALAAAVLIAPQRPAAARLRHVTGAAAGSRRLPRPTVGLGVVLGATIGAGLVAGVGGALAGLLAGTIWVRRRAARRAGIAAAVAGTELADALTRICDELRAGAHPAAALSGIDADGTTARAALRPAEAALRLGETVPAALARSTPHPALTEDVDRVAAAWALSDRHGIPLATLLSSVATDVRWRVEFGNRVRAELAGPRATATVLTLLPALGLGFGQLMGADPIGVLRDGVLGAVLLVGGTLLTAAGIAWSERILAAAVPR*