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cn_combo_scaffold_6876_5

Organism: CN-SCN_Pseudonocardia_86x

partial RP 15 / 55 MC: 1 BSCG 14 / 51 MC: 2 ASCG 7 / 38 MC: 1
Location: comp(2430..3068)

Top 3 Functional Annotations

Value Algorithm Source
LuxR family transcriptional regulator n=1 Tax=Pseudonocardia sp. P1 RepID=UPI0001FFDA8C similarity UNIREF
DB: UNIREF100
  • Identity: 75.7
  • Coverage: 210.0
  • Bit_score: 298
  • Evalue 4.80e-78
Two-component system response regulator {ECO:0000313|EMBL:EFL06443.1}; TaxID=591158 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. AA4 similarity UNIPROT
DB: UniProtKB
  • Identity: 67.8
  • Coverage: 214.0
  • Bit_score: 270
  • Evalue 1.50e-69
two component LuxR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 68.5
  • Coverage: 216.0
  • Bit_score: 269
  • Evalue 6.70e-70

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Taxonomy

Streptomyces sp. AA4 → Streptomyces → Streptomycetales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 639
GTGATCCGCGTCGTCGTCGCCGACGACCAGGCCGCCGTCCGCGCCGGGCTCGTCATGATCCTCGACGCCGCACCCGACGTGGAGGTCGTCGGCGAGGCGTCCGACGGCGCCCAGGCCGTCCGGGCGGCCACGTCGCTGCGCCCCGACGTCGTCCTCATGGACATCCGGATGCCCGGTGTCGACGGCATCACCGCGACCCGCGAGCTCACCACCGCCGGCGTCGCCGAGGTGCTGGTGCTCACCACGTTCGACCTCGACGACCTCGTCGACGGCGCACTCGCCGCCGGGGCCGCGGGATTCCTGCTCAAGACCGTCGACGCCCCCGCGCTCGTCGACGCCGTCCGGTCGGTCGCCCGTGGCGACGGGGTGCTCGCGCCCGAGGTGACCCGCCGCGTCATCGCGCGGCTGTCCGCGCGTCCGGCGCGGCCCCCGGTCCCGGGTCTGCACGACCTCACCGCCCGCGAACGCGACGTCCTCGGCTGCCTGGGCCGCGGGTTGTCCAACGCCGCCATCGCCGACGAGCTGGTGATCACCGAGGCCACGGCCAAGACCCACGTGTCCAGGGTGCTCGCGAAGCTCGGCCTGCGCTCGCGCACCCAGGCCGCGCTCGCGGCGCAGGACGCGGGGCTGGTCCCCTGA
PROTEIN sequence
Length: 213
VIRVVVADDQAAVRAGLVMILDAAPDVEVVGEASDGAQAVRAATSLRPDVVLMDIRMPGVDGITATRELTTAGVAEVLVLTTFDLDDLVDGALAAGAAGFLLKTVDAPALVDAVRSVARGDGVLAPEVTRRVIARLSARPARPPVPGLHDLTARERDVLGCLGRGLSNAAIADELVITEATAKTHVSRVLAKLGLRSRTQAALAAQDAGLVP*