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cn_combo_scaffold_7548_7

Organism: CN-SCN_Pseudonocardia_86x

partial RP 15 / 55 MC: 1 BSCG 14 / 51 MC: 2 ASCG 7 / 38 MC: 1
Location: 5847..7838

Top 3 Functional Annotations

Value Algorithm Source
GAF domain protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4D036_PSEUX similarity UNIREF
DB: UNIREF100
  • Identity: 85.3
  • Coverage: 667.0
  • Bit_score: 1072
  • Evalue 0.0
GAF domain protein {ECO:0000313|EMBL:AEA24869.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain similarity UNIPROT
DB: UniProtKB
  • Identity: 85.5
  • Coverage: 667.0
  • Bit_score: 1073
  • Evalue 0.0
GAF domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 85.5
  • Coverage: 667.0
  • Bit_score: 1073
  • Evalue 0.0

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Taxonomy

Pseudonocardia dioxanivorans → Pseudonocardia → Pseudonocardiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1992
TTGCCACTCACCGGCACAGTCCGGACGACCGACTCGTTCCCGGTGCCGATCACCGGGCGGGACGCAGAACACCCGCAACGGATGTCGGTCGACGGGGTGCTCGCGCTGCTGGGCTCGATCCGCGCCGACTCCGGTCCGGGCCCCGGGGTGGCGGGCCTGCTCGCCCACGAGGACCTGCCGTCGGACGTGCTCGCCCTGCTCGAGGACGAGGTCCTGCGGGTGCGCGGCACGGTGACCCGGATGGCCCGCCGCGAGCACGAGCTGTCGGCGCTGTTCTCCTCCGCGCGCGAGCTGGCCGAGGAGCGCGAGCCCGCGCTGCTGCTGCGGCGGCTGGTGCAGCGCGCGTTCGACCTGCTGGGCACCGACGTCGCCTACGTCGCGTCGTTCGAGCAGCCCAGCGGGGTGCTCGTCATCCACGAGGCGGTCGGCTCGGTGACCTCGGAGCTGATGGGGGTGCGGGTGCCGCCGGGCAAGGGCCTGGCGATGAAGGTCGCGCAGAGCCGCGCGGCATGCCGCAGCACCCGCTACATGCAGGACCGCGGCATCGACCACGACGACGTGGTCGATGCCGTCATCGACGGTGAGGGCATCGTGTCGATGGTGGGCGTGCCGATGCTCGCGGGCGACGACGTCGTCGGCGTGCTCGTCGCGGCGAACCGGTCGGTGCGGACGTTCTCGACCGAGGAGATCGCGCTGCTGTCGGCGTTCGCCGACCACGCCTCGGTGGTGCTGCAGACGGCGCGGCTGCTCGACGATGCGGTCGCGTCGGCGGCCGCGGCGGAGCAGGCGTGCGCGGAGCTGACCCGCCAGACCTCGGCGATGGAACGCACGGCCGCCGTCCACTCCGAGCTGACGGCGGCGGTGCTGCGCGGCGGCAGCGCCCAGGAGGTGGCCGACATCCTCGGCGGCGTGCTGCGTCGGCGCATCACGATCCTCGACCGCCGCGGCACCCCGCTGGCCGACTCGGGCGGCCGGGCCGCCGCGGCCGCCGAGCCCCCCGACGACGGCGACGACCACACCGGCTTCCCGACGGCTATCCGTGCCGCGCTGCGCGAGAGCCGCCGCACCGGGCAGTGCGTGCCGCTGCGCGAGGGCGCGTCCGGGCTCGCCGTCGCCGTCGTGGCGGGGGAGTCGCTGATGGGCGCGATCCTGGTCGACGACGGCGAGATCGCCCTGACGCCGGCCGACCGGCGCACCGTCGAGCGCGCGAGCCAGATCGTCGCGCTGCTGACGCTGCGTCAGGAGGCTGTCGCCGACGCCGAGGAACGCGTCCGCGGCGAGCTGGTGTCCGATCTGCTCGGCGCGCGCTCGGTGTACCGCCACGAGCTGCTGCTGCGGGCCCGCTCACGCGGCATCCGCATCGACGAGCTGCGCACCCCCGTCGTGGTGATCGTCGAACCCGAGTACCGCCGCGCCGCGCTGCGCGCCGCCCACGACATCGTCCCCGGCGGGCTGGCCGGTGAGCACGAGGGCACCGTCGTCGTCCTGGTGTCCGAGGCCCCCGGCGACGCCGCCGACCTCGTCCGCACCCGGCTCGCGGCGACGCTGGGCTGCCCGCTGCTCGTCGTCGCCGGCCCCACGGGGACGCCGGAGTCGCTGGCCGACCGGTTCGACCTCGCCCGCCGCTGCGCCCGGCTGCTGGGCGCGCTCGGGCGCACCGACACCGCCGCCACCACCGACGGCTACGCGCCCTACCTCGCCCTGTTCGGCTCCGGCCGCGAGGACCTCGGCGCCTTCATCGAGCAGACCCTCGGCCCGGTCATCGAGTGGGATGCCGAGCGCGGCACCGACCTCGTCGCGACCCTGCTCGGGTTCGTCGAGGCCAACGCCAGCCCGACGAAGACGGCACGCAACCTCGGGCTGCACACCAACACCGTCCTGCAGCGCCTCGACCGCATCACGACCCTGCTCGGGGACAGCTGGCGCGACGCCGAACCCCTCTTCCGGATCTCCATCGCGGCGCGTCTGCACCAGCTCGCAGCCGTCGTGTGA
PROTEIN sequence
Length: 664
LPLTGTVRTTDSFPVPITGRDAEHPQRMSVDGVLALLGSIRADSGPGPGVAGLLAHEDLPSDVLALLEDEVLRVRGTVTRMARREHELSALFSSARELAEEREPALLLRRLVQRAFDLLGTDVAYVASFEQPSGVLVIHEAVGSVTSELMGVRVPPGKGLAMKVAQSRAACRSTRYMQDRGIDHDDVVDAVIDGEGIVSMVGVPMLAGDDVVGVLVAANRSVRTFSTEEIALLSAFADHASVVLQTARLLDDAVASAAAAEQACAELTRQTSAMERTAAVHSELTAAVLRGGSAQEVADILGGVLRRRITILDRRGTPLADSGGRAAAAAEPPDDGDDHTGFPTAIRAALRESRRTGQCVPLREGASGLAVAVVAGESLMGAILVDDGEIALTPADRRTVERASQIVALLTLRQEAVADAEERVRGELVSDLLGARSVYRHELLLRARSRGIRIDELRTPVVVIVEPEYRRAALRAAHDIVPGGLAGEHEGTVVVLVSEAPGDAADLVRTRLAATLGCPLLVVAGPTGTPESLADRFDLARRCARLLGALGRTDTAATTDGYAPYLALFGSGREDLGAFIEQTLGPVIEWDAERGTDLVATLLGFVEANASPTKTARNLGLHTNTVLQRLDRITTLLGDSWRDAEPLFRISIAARLHQLAAVV*