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cn_combo_scaffold_9055_4

Organism: CN-SCN_Pseudonocardia_86x

partial RP 15 / 55 MC: 1 BSCG 14 / 51 MC: 2 ASCG 7 / 38 MC: 1
Location: comp(3509..5935)

Top 3 Functional Annotations

Value Algorithm Source
DNA ligase {ECO:0000256|HAMAP-Rule:MF_01588, ECO:0000256|RuleBase:RU000618}; EC=6.5.1.2 {ECO:0000256|HAMAP-Rule:MF_01588, ECO:0000256|RuleBase:RU000618};; Polydeoxyribonucleotide synthase [NAD(+)] {EC similarity UNIPROT
DB: UniProtKB
  • Identity: 85.2
  • Coverage: 812.0
  • Bit_score: 1371
  • Evalue 0.0
DNA ligase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CPA8_PSEUX similarity UNIREF
DB: UNIREF100
  • Identity: 85.3
  • Coverage: 812.0
  • Bit_score: 1372
  • Evalue 0.0
DNA ligase similarity KEGG
DB: KEGG
  • Identity: 85.2
  • Coverage: 812.0
  • Bit_score: 1371
  • Evalue 0.0
  • rbh

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Taxonomy

Pseudonocardia dioxanivorans → Pseudonocardia → Pseudonocardiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 2427
GTGCCCGCCACTAATCTCTCCGACGTGAGCACCGACAGCCCCGCCGGGACCGCTCCCGAGCCCGCACCCGACGCGGCCCGGGAGCGGCACTCCGCGCTCGCCACCGAGGTCGCCGACCACCAGTTCCGGTACTACGTGCTCGACACGCCGGTCCTGTCCGACGGCCAGTTCGACGAGCTGTGGCGCGAGCTGGAAGGGCTCGAGGAGCAGTACCCGGACCTCGTGACGGCCGACTCGCCGACGCAGAAGGTCGGCAGCCGCTTCGCCACCGAGTTCGCCGCGCACGACCATCTCGAACGCATGCAGAGCCTCGACAACGCGTTCAGCGACGAGGAACTGCGCACCTGGGCCGAGCGCGTCGGGCGCGAGGTCGGCGACGGCATCCACTACCTGTGCGAGCTCAAGATCGACGGGCTCGCCGTGAACCTGTTGTACGAGAACGGGAAGCTCGTCCGCGCGCTCACCCGGGGCGACGGGCGCACCGGCGAGGACGTCACCCTCAACATGCGCACCCTGGTCGAGGTGCCGGAACAGCTCACCGGCACCGCCGAGTTCCCTGTGCCGGAGCTGATCGAGGTGCGCGGCGAGGTCTACTTCCGGCTGGAGGACTTCCAGGCGCTCAACACCTCCCTCGTCGAGGCCGGGAAGCCGCCGTTCGCGAACCCGCGCAACACCGCGGCAGGGTCGTTGCGGCAGAAGGACCCCCGGGTCACCGCGTCGCGCAACCTGCGGCTGATCTGCCACGGCCTCGGCAAGCGGGAGGGCTTCAGCCCCGACCGCCTGTCCCACGCCTACGACGCGTTGCGCGCCTGGGGGCTGCCGGTCTCCGAGCGCACCAAGATCGTGCAGGGGATCGACCAGGTCATCGCGCACGTCCAGTACTGGGGCGAGCACCGTCACGACATCGAACACGAGATCGACGGCGTCGTCGTCAAGGTCGACGAGGTGGCCCTGCAGCGCAGGCTCGGCTCCACCTCGCGGGCGCCGCGCTGGGCGATCGCGTTCAAGTACCCGCCCGAGGAGGTCACGACGAAGCTCCTCGACATCCAGGTCAACGTCGGGCGCACCGGCCGGGTCACCCCCTTCGCGGAGATGGAGCCGGTCGTCGTCGCGGGCTCCACGGTGTCGCTCGCGACGCTGCACAACGCCGACGAGGTGCGCCGCAAGGGCGTGCTCATCGGAGACCGCATCGTCATCCGGAAGGCGGGCGACGTCATCCCCGAGGTCCTCGGACCGATCGTCGACGTCCGCGACGGCACCGAACGCCAGTTCGTCATGCCGACGCACTGCCCCGAGTGCGGCACCGAGCTGGCGCAGCAGAAGGTCGGCGACGTCGACATCCGCTGCCCCAACGCCCGCTCCTGCCCCGCGCAGCTGCGGGAGCGGCTGTTCCACATCGCGGGTCGCGGCGCGTTCGACATCGAGGCCCTCGGCTACAAGGCGGCGACCGCGCTGCTCGAGGCGGGCGTGGTCGCCGACGAGGGCGACGTCTTCTCGCTCACCGAGGACGACCTGCTGCAGGTCGACCTATTCCGCACCAAGGCCGGCGTGCTCAGCGCCAACGGCCGCAAGCTGCTGGAGAACCTGGAGAAGGCCAAGGACCAGCCGCTGTGGCGAGTCCTCGTCGGGCTCTCGATCCGGCACGTCGGACCCACCGCCGCGCAGGCCCTCGCCCGCGAGTTCGGGTCGCTCGACGCGATCGAGGAGGCCGCCGCGCGGGCCGCGGAGGAGACCGAGAAGGCCGGCGTCGAGATCACCTCCGACGGCTCGGCCGACGACAGCGGCTCCGACGGCTCGGCCGACGACAGCGGCTCCGACGGCTCGGCCGACGACAGCGGCTCCGACGGCTCGGCCGACGACGCCGACCCGGAGGTCCGCGCCGCCGAGACCGACGCTTCTCCCGAGGAGGTGGCCGATGCGGAGGAAGAAGCCGCCGTCGCTGCTGCCAAGGCCGAACGCGACGCGGCCCGGGCCAAGGCCAAGGCCGTCGCCGCCGCCCTCGCCCCCATCGCCGGGGGAGAGGGCGTCGGTCCGACCATCGCCGCCGCCCTGCGCGACTGGTTCACCGTCGACTGGCACCGCGAGGTCGTCGCCAAGTGGCGGGCCGCCGGGGTGCGGATGGTCGACGAGGTCGACGAGTCCATCCCCCGCACCCTCGAAGGGCTCTCGATCGTCATCACCGGGTCGATGGCCGGCTGGTCGCGCGACGAGGCCAAGGAGGCCATCGCCGCACGTGGCGGCCGTGCTGCCGGGTCGGTGTCGAAGAAGACCGCCTTCCTCGTGGCCGGCGACGCCCCGGGCTCCAAGTACGACAAGGCCCTCGATCTGGGCGTCCCGATCCTCGACGAGGCAGGCCTCGGAGTACTCCTGGCCTCGGGCCCGGAGGCGGCGGAGAAGGTCGCCACCCGCGCCGACTCCACCGACTGA
PROTEIN sequence
Length: 809
VPATNLSDVSTDSPAGTAPEPAPDAARERHSALATEVADHQFRYYVLDTPVLSDGQFDELWRELEGLEEQYPDLVTADSPTQKVGSRFATEFAAHDHLERMQSLDNAFSDEELRTWAERVGREVGDGIHYLCELKIDGLAVNLLYENGKLVRALTRGDGRTGEDVTLNMRTLVEVPEQLTGTAEFPVPELIEVRGEVYFRLEDFQALNTSLVEAGKPPFANPRNTAAGSLRQKDPRVTASRNLRLICHGLGKREGFSPDRLSHAYDALRAWGLPVSERTKIVQGIDQVIAHVQYWGEHRHDIEHEIDGVVVKVDEVALQRRLGSTSRAPRWAIAFKYPPEEVTTKLLDIQVNVGRTGRVTPFAEMEPVVVAGSTVSLATLHNADEVRRKGVLIGDRIVIRKAGDVIPEVLGPIVDVRDGTERQFVMPTHCPECGTELAQQKVGDVDIRCPNARSCPAQLRERLFHIAGRGAFDIEALGYKAATALLEAGVVADEGDVFSLTEDDLLQVDLFRTKAGVLSANGRKLLENLEKAKDQPLWRVLVGLSIRHVGPTAAQALAREFGSLDAIEEAAARAAEETEKAGVEITSDGSADDSGSDGSADDSGSDGSADDSGSDGSADDADPEVRAAETDASPEEVADAEEEAAVAAAKAERDAARAKAKAVAAALAPIAGGEGVGPTIAAALRDWFTVDWHREVVAKWRAAGVRMVDEVDESIPRTLEGLSIVITGSMAGWSRDEAKEAIAARGGRAAGSVSKKTAFLVAGDAPGSKYDKALDLGVPILDEAGLGVLLASGPEAAEKVATRADSTD*