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cn_combo_scaffold_9097_2

Organism: CN-SCN_Pseudonocardia_86x

partial RP 15 / 55 MC: 1 BSCG 14 / 51 MC: 2 ASCG 7 / 38 MC: 1
Location: 1127..3400

Top 3 Functional Annotations

Value Algorithm Source
Protein-export membrane protein SecD n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CNY4_PSEUX similarity UNIREF
DB: UNIREF100
  • Identity: 84.3
  • Coverage: 757.0
  • Bit_score: 1214
  • Evalue 0.0
Protein-export membrane protein SecD {ECO:0000313|EMBL:AEA22789.1}; Flags: Precursor;; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source=" similarity UNIPROT
DB: UniProtKB
  • Identity: 84.3
  • Coverage: 757.0
  • Bit_score: 1214
  • Evalue 0.0
protein-export membrane protein SecD similarity KEGG
DB: KEGG
  • Identity: 84.3
  • Coverage: 757.0
  • Bit_score: 1214
  • Evalue 0.0
  • rbh

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Taxonomy

Pseudonocardia dioxanivorans → Pseudonocardia → Pseudonocardiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 2274
TTGAAAAGTCCCCTGCTCGCGCGCGCTCTCGCGGCGCTGGTCGTCGTCGGTGGTTCGGCCGCCGTCGCCGCGACCGGTTCACCCACACTCGGCCTGGATCTGCGGGGTGGCACGCAGATCGTCCTGGAGACCCGGGACGCCCCGGGCATCACGGCCGACTCCGAGGCCACCGACCGTGTGCTGGAGGTGTTGCGCGGCCGGGTCGACGGTCTGGGGGTCGCGGAGCCGTCGCTGAACCGGTCGGGCGAGCGGCGGATCGTGGTGGAGCTGCCGGGTCTGCAGGATCCGGCGGAGGCGGCGGAGGTGTTGGGCCGCACCGCGCAGCTGACGATCCGCCCGGTGCTGAACACGCCGACGGCGGATGCCCAGCAGGTCGTCGACGACTCGGGGGCGCCGTTGCTCGTGGGTCCGCCGGCGCTGGTGGGCGAAGACGTGGAGTCGGCGCAGTCGGCGGCGGGCTCACAGGGGGTGATCGGCTCGGTCGTCGACGTCTCGTTCTCCGGCGAGGGCGGCGAGCGGTGGCGGCAGCTGACGGCGCAGACGGCGTGCGCCCCGGCCGGGGATCCGGCGCGGCGGATCGCGATCGTCCTGGACTCGCAGGTGATCTCGTCGCCGCAGCTGGACCCGTCGATCGGCTGTGGCGTCGGCATGCTGGGCGGGAGCACGCAGATCAGCGGCTCGTTCAGCGTGGAGCAGGCGCGGGAGCTGGCGATCCTGATCCAGGGTGGCGCGCTGCCGGTGCCGGTGGAGATCATCGAGCAGCGGACGGTCGGCCCGACGCTGGGTGCGTCGGCGATCGAGGCGAGCGTGCTGGCCGCGCTGATCGGGACGGGGCTGACAGGTGTGTTCCTGCTGGTGGCGTACCGGCTCGCGGGCCTGGTGGCGGTGGTCGCGCTGGCCGGGTACGCCCTGGTGGCGTACGCGGGCCTGATCGCGCTGGGGGCGACGTTGACGTTGCCGGGCCTGGCGGGGTTCGTGCTGGCGATCGGTATGGCCGTCGACGCGAACGTGCTGGTCGCGGAGCGGGCGCGGGAGGAGTACGCGAAACGGCCGCGGCTGGAGAGGGCATCGGAACGCGGGTACAAGGGCGCGTTCACGGCGGTGATCGACTCCGCGGTGACGACGTTGCTGGCGGGTGCGTTGCTGTTCTGGCTGGCGTCGGGGCCGGTGCGCGGGTTCGGGGTGACGCTGACGCTCGGTGTCGTGGTGTCGCTGTTCTCGGCACTGGTGCTGTCGCGGCTGCTGACGATCTGGATGGTGCGCCGCAAGGTGATCCTCAAGCACCCGGCGTGGACGGGGCTGTCGACGATCGGGCCGGTGCGGCGCCGGCTGGAGAAGGTGGATCCGGGGCTGCTCCGGCCGGCGGGCCGCTACCTGGCGATCTCGGCGGTCGTCGTCGTGGCGGCGCTGGCGGGGCTCGCGGTGCGGGGCCTCGACCTGGGTGTGGAGTTCACGGGCGGGCGTTCGGTCGAGTTCACGACGACGAACCCGGTCGACGCCGACGCCGCGCGGGCCGCGGTGGCCGAGGCGGGGCTGGGCGGGCTGCCCGTCCAGATGACCGGCGACGGCGGCATCTCGGTGCGCGGCAACGACATCGTCGACGCCGATGTGGCGGCGCTGCGGGAGGCGCTGGCCGCGGCGGGTGGTGGCGCCGAGCTGGAGCAGGACGAGCTGATCGGGCCGAGCCTGGGCGCGGAGCTGGCGCGGGGCGCGTTGATCGCGCTGGCGGTGGCGCTGGCGGCGCAGCTGGTCTACCTGGCGGTGCGGTTCCGCTGGACGTACGGCGCGGGCGCGGTGGCGGCGCTGCTGGCCAACGTGGCGGTCGTCATCGGCTGGTTCGCGTGGACGGGCCGCACGATCGACGGCGTGTTCGTCGCGGCGCTGCTGACGGTGATCGGCTACACGGTGAACGACTCGGTGGTGGTGTTCGACCGGGTGCGGGCGGAGCGGGCGACGCGACGGAAGGAGCCGTTCCACCGGGTCGCGGGCCAAGCGGTGCTCTCGACGGTGCCGCGCACGGTGAACACGGGCCTGTCGACGTTGATGATCCTGGCGGCGCTGCTGGTGCTGGGCGGGGAGACGTTGGCCGACTTCGCGTTGGCGCTGATCCTGGGCATCGTCGCGGGCACGATCTCGACGGTCACGGTCGCCGTGCCGCTGACGATCGCGCTGCAGCGCCGGTTCGGTGACGGCGATCCGGCGACGCGGAGGAAGCGGCCGACGGGCAGGTCGTCGACGCGCACGCCGAAGCGTGCGGACGGCGCCGTCGTCTGA
PROTEIN sequence
Length: 758
LKSPLLARALAALVVVGGSAAVAATGSPTLGLDLRGGTQIVLETRDAPGITADSEATDRVLEVLRGRVDGLGVAEPSLNRSGERRIVVELPGLQDPAEAAEVLGRTAQLTIRPVLNTPTADAQQVVDDSGAPLLVGPPALVGEDVESAQSAAGSQGVIGSVVDVSFSGEGGERWRQLTAQTACAPAGDPARRIAIVLDSQVISSPQLDPSIGCGVGMLGGSTQISGSFSVEQARELAILIQGGALPVPVEIIEQRTVGPTLGASAIEASVLAALIGTGLTGVFLLVAYRLAGLVAVVALAGYALVAYAGLIALGATLTLPGLAGFVLAIGMAVDANVLVAERAREEYAKRPRLERASERGYKGAFTAVIDSAVTTLLAGALLFWLASGPVRGFGVTLTLGVVVSLFSALVLSRLLTIWMVRRKVILKHPAWTGLSTIGPVRRRLEKVDPGLLRPAGRYLAISAVVVVAALAGLAVRGLDLGVEFTGGRSVEFTTTNPVDADAARAAVAEAGLGGLPVQMTGDGGISVRGNDIVDADVAALREALAAAGGGAELEQDELIGPSLGAELARGALIALAVALAAQLVYLAVRFRWTYGAGAVAALLANVAVVIGWFAWTGRTIDGVFVAALLTVIGYTVNDSVVVFDRVRAERATRRKEPFHRVAGQAVLSTVPRTVNTGLSTLMILAALLVLGGETLADFALALILGIVAGTISTVTVAVPLTIALQRRFGDGDPATRRKRPTGRSSTRTPKRADGAVV*