ggKbase home page

cn_combo_scaffold_9999_1

Organism: CN-SCN_Pseudonocardia_86x

partial RP 15 / 55 MC: 1 BSCG 14 / 51 MC: 2 ASCG 7 / 38 MC: 1
Location: comp(292..1059)

Top 3 Functional Annotations

Value Algorithm Source
Short-chain dehydrogenase/reductase SDR n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CQK9_PSEUX similarity UNIREF
DB: UNIREF100
  • Identity: 84.6
  • Coverage: 247.0
  • Bit_score: 413
  • Evalue 2.10e-112
short-chain dehydrogenase/reductase SDR similarity KEGG
DB: KEGG
  • Identity: 84.6
  • Coverage: 247.0
  • Bit_score: 413
  • Evalue 5.90e-113
  • rbh
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:AEA22801.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia d similarity UNIPROT
DB: UniProtKB
  • Identity: 84.6
  • Coverage: 247.0
  • Bit_score: 413
  • Evalue 2.90e-112

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Pseudonocardia dioxanivorans → Pseudonocardia → Pseudonocardiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 768
ATGACGGAGGACCAGGGGCCCGCGGGCCCCGTTGCGGTGGTGACGGGTGCGGGCTCGGGCATCGGGAAGGTCGTCGCCCATGCATTCCTCGGTGCGGGGTACCGCGTCGCGGTGACCGGGCGCCGGCGGGAGCGACTCCAGGAGGCCCTCGCTGGTGTCGACGGTGCGGCCGACGCCCTCGTCGTGCCCGCCGACGTCGGTGACCCCGACTCCGTCGACGAGCTGTTCGCCGCGGTGCGGGAGCGGTGGGGACGGGTGGACGTCCTGTTCAACAACGCAGGCACCTTCGGGCCGGCCGCCACACCGGACGAGGTCCCGGTCGACGCCTGGCTCGACACCGTCCGCACCAACCTCACGGGGACCTTCCTCTGTGCGCGCGCCGCCTTCGCGACGATGCGCGCCCAGTCCCCGCAGGGCGGCCGCATCATCAACAACGGCTCCATCTCCGCGCAGGTGCCGCGACCGTGGAGTGCGGCGTACACGTCCACCAAGCACGGGGTCACCGGCCTGACCAAGTCGCTGTCGCTGGACGGGAGGCCCTTCGGCATCGCGTGCGGGCAGATCGACATCGGCAACGCCGCCACCGACATGACCGCCGGCTTCTCCTCCGGTGCACGTCAGGCGGATGGTTCGACCGCTGCCGAGGCGACCTTCGACGTCGCGCACGTGGCCGACGCGGTGCTCTACATGGCAGGCCTTCCGCTGGAGGCCAACGTCCAGTTCCTGACGATCGCGGCGCGCACCATGCCCTACATCGGACGTGGCTGA
PROTEIN sequence
Length: 256
MTEDQGPAGPVAVVTGAGSGIGKVVAHAFLGAGYRVAVTGRRRERLQEALAGVDGAADALVVPADVGDPDSVDELFAAVRERWGRVDVLFNNAGTFGPAATPDEVPVDAWLDTVRTNLTGTFLCARAAFATMRAQSPQGGRIINNGSISAQVPRPWSAAYTSTKHGVTGLTKSLSLDGRPFGIACGQIDIGNAATDMTAGFSSGARQADGSTAAEATFDVAHVADAVLYMAGLPLEANVQFLTIAARTMPYIGRG*