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cn_combo_scaffold_10006_9

Organism: CN-SCN_Pseudonocardia_86x

partial RP 15 / 55 MC: 1 BSCG 14 / 51 MC: 2 ASCG 7 / 38 MC: 1
Location: 5683..6168

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, MarR family n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CLW7_PSEUX similarity UNIREF
DB: UNIREF100
  • Identity: 74.1
  • Coverage: 158.0
  • Bit_score: 232
  • Evalue 2.50e-58
MarR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 74.1
  • Coverage: 158.0
  • Bit_score: 232
  • Evalue 6.90e-59
Transcriptional regulator, MarR family {ECO:0000313|EMBL:AEA28249.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia di similarity UNIPROT
DB: UniProtKB
  • Identity: 74.1
  • Coverage: 158.0
  • Bit_score: 232
  • Evalue 3.40e-58

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Taxonomy

Pseudonocardia dioxanivorans → Pseudonocardia → Pseudonocardiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 486
GTGTCGGAGCTCGACATCGAGAGCGCCGGGCGCGTCGGCACCGAGCTGGTCCGCCTCGTGCGGCTCATCGAGCGCGCCTACGCCCACCACCACATCGAGCACCCCGACGGCGTCGACCGCGCCACCTACGTGCTGCTCGTGCACCTCGTCGACGGCGGGCCCTACCGGTCGAGCGCGCTCGCCGAGGTGGTGCACTCCGACCCGTCGACGGTGAGCAGACAGATCGCCCAGCTCGTCAAGCTCGGGCTCGTCGGCCGCGTCTCCGACCCCACCGACGGCCGCGTCGTCCTGCTCGTCGCCACCGAGGAGGGCGAACGGGTACTCGTCGAGAACCGGCGCCTGCGCAACGAGGGGATCGCGCGGATGCTCGCGCACTGGCCTGCCGCGGAGCGGGAGCAGTTCGCCACCCTGTTGGCCAGGTTCACGACCGACTTCGAGCAGTTCAGGACAGCGAGCACACCCCCGGGTGGTGCCGGGCTACGCTGA
PROTEIN sequence
Length: 162
VSELDIESAGRVGTELVRLVRLIERAYAHHHIEHPDGVDRATYVLLVHLVDGGPYRSSALAEVVHSDPSTVSRQIAQLVKLGLVGRVSDPTDGRVVLLVATEEGERVLVENRRLRNEGIARMLAHWPAAEREQFATLLARFTTDFEQFRTASTPPGGAGLR*