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cn_combo_scaffold_10195_5

Organism: CN-SCN_Pseudonocardia_86x

partial RP 15 / 55 MC: 1 BSCG 14 / 51 MC: 2 ASCG 7 / 38 MC: 1
Location: 3289..4251

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, AraC family n=1 Tax=Methylibium petroleiphilum (strain PM1) RepID=A2SEG7_METPP similarity UNIREF
DB: UNIREF100
  • Identity: 60.4
  • Coverage: 318.0
  • Bit_score: 363
  • Evalue 2.40e-97
Transcriptional activator NphR {ECO:0000313|EMBL:EWS53748.1}; TaxID=1430884 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Methylibium.;" source="Methylibium sp. T29.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 61.0
  • Coverage: 318.0
  • Bit_score: 368
  • Evalue 1.40e-98
AraC family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 60.4
  • Coverage: 318.0
  • Bit_score: 363
  • Evalue 6.70e-98

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Taxonomy

Methylibium sp. T29 → Methylibium → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 963
ATGCCTCGTGTGCTGTCGACGGTCGACGTGCCCGAGCGGGACCGGCTGGCCTACTGGACCGATGCGGTGTGCGACGCGTACGTGCAGCTCGACTGCCGTGCGCCGGGGCACCACCGGCAGGTCGACGGTGAGATCCGGGTCGACGTGTTGGCGACGTTGGAGCTGTCGCGGGTGACGGCGACGGCGCAGCAGGTGCGCCGGACACCGTCGACGATCGCGCGGTCGGGCGAGGACTACTTCCTCGTGAGCGTGCAGACGGCGGGGACGGGCCTGATCAGCCAGGACGACCGGGCGGCGGTGCTGCGGCCGGGCGACTTCGCGCTGTACGACTCGACGCGCCCCTACGAGCTGACGTTCGCGGGCGACTTCCAGCAGTACGTGCTGATGCTGCCGGGTGCGACGTTGCGGTCGCGGCTGCGCGACACGGCGGGGCTGACGGCGCGGACCGTCGGCGGCTCACGCGGCGCCGGCCATCTGATGATCAACATGATCGAGACGCTCGCCGCCGACATCGACGTCCTGCAGCCGGGTGCGGCCGCGGCGGTGGCGGCCAGCGTCGAGCACATCGTGGTCGCGGGTCTGAGCGGGCTGGCGGGTGACGATCTCGCACCACCCACCGACGACGCGGCGTTGCTGGCGGCGTCGCGTCGCGAGCAGGTGAAGGTGTTCGCGCGGTCGCGGCTGCGGGATCCGGGGTTGTCGGTGGCGGGGATCGCGGCGGCACTGCACCTGTCGGTGAGCACGGTGCACCGGTGCTTCGCGGGCGAGCCGGCGTCGGTGGCGGAGTGGATCCGGGCGGAGCGTCTCGACGCGATCCGCGACGACCTGTGCGATCCGGCGTTGCGGCACCGCACGGTGTCCGACGTGGCGTTCGGCTGGGGGTTCGTCGACGCCTCCCATTTCAGCCGGGCGTTCCGCACGCGGTTCGGGTGTGCACCGAGCGACGTGCGCGGATCGGCCTGA
PROTEIN sequence
Length: 321
MPRVLSTVDVPERDRLAYWTDAVCDAYVQLDCRAPGHHRQVDGEIRVDVLATLELSRVTATAQQVRRTPSTIARSGEDYFLVSVQTAGTGLISQDDRAAVLRPGDFALYDSTRPYELTFAGDFQQYVLMLPGATLRSRLRDTAGLTARTVGGSRGAGHLMINMIETLAADIDVLQPGAAAAVAASVEHIVVAGLSGLAGDDLAPPTDDAALLAASRREQVKVFARSRLRDPGLSVAGIAAALHLSVSTVHRCFAGEPASVAEWIRAERLDAIRDDLCDPALRHRTVSDVAFGWGFVDASHFSRAFRTRFGCAPSDVRGSA*