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cn_combo_scaffold_10570_4

Organism: CN-SCN_Pseudonocardia_86x

partial RP 15 / 55 MC: 1 BSCG 14 / 51 MC: 2 ASCG 7 / 38 MC: 1
Location: comp(2940..4148)

Top 3 Functional Annotations

Value Algorithm Source
Extracellular ligand-binding receptor n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CZ98_PSEUX similarity UNIREF
DB: UNIREF100
  • Identity: 93.0
  • Coverage: 402.0
  • Bit_score: 743
  • Evalue 1.40e-211
ABC transporter substrate-binding protein similarity KEGG
DB: KEGG
  • Identity: 93.0
  • Coverage: 402.0
  • Bit_score: 743
  • Evalue 3.90e-212
Extracellular ligand-binding receptor {ECO:0000313|EMBL:AEA24802.1}; Flags: Precursor;; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source= similarity UNIPROT
DB: UniProtKB
  • Identity: 93.0
  • Coverage: 402.0
  • Bit_score: 743
  • Evalue 2.00e-211

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Taxonomy

Pseudonocardia dioxanivorans → Pseudonocardia → Pseudonocardiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1209
ATGATGCGAAAGCCCCTCCTGATCGCGGCAGCAGCCGTCACCGCGCTGCTCGCGGCCGCCTGCGGAAACGTCTCGAGCAGTTCGGGATCGGGGGGAGGGGAGACCCCGCCGGGCATCACGGCCGACCAGATCACGATCGGCGCGACGCTGCCGATCACCGGCACCGCCGCCGTCTCGGGCCAGGGTCTGCAGGCCGGCATCCAGATCGCCGTCGACGAGATCAACGCCGACGGCGGCATCGGTGGCCGCAAGGTCAACGCGATCATCCTCGACGACGGCTACACCGCCGACCGCGTCGTCACCAACGTCCGGCGCCTGGTCTCGCAGGAGAAGGTCTACGCGATCGTCGCCCCCGCGGGCTCGCAGGGCCTGCCCGGCACGTGGCAGTTCCTCGCGCAGAACAAGACACCGATGTGGGGCCCGATCTCCCCGGCCGACCCGAAGCAGGCCGAGGTCTACCTGCTCAGCGCCACCCGCGCCGCGCAGGACTCCGTCGCGATCGACTACTTCGCCAAGAAGGGCGCCAAGCGCCTCGCGGTCATCCAGCAGGACAACGACCTCGGCGTCTCGGCCAAGCAGGCGCTCACCGCGCAGATGCCGAAGCACCCCGACATGCAGATCGTCGCGAACGAGACGACGCAGGCCGGTAACACCGAGGTCAGCTCCGCGGTCAACAACGTCGTCGCGGCCAAGCCCGACGCGGTGCTGCTCGCCGAGGACAACACCTCGACCGCGCTGATCCTCAAGCAGCTGCGGGCCCAGGGCTTCACCGGCATGGTCTTCGCCGACCAGGGCGCCGGCGGTACCGGCGGCACCTCGACGGTCGGCCCGGCGGGCGACGCGGCCGAGGGCTTCCTCGGCGGCATGCAGGCCGACACCGTCTCCACGGACAACCCGGCCGTCGAGCACTGGCGCGACCTGGCCAAGAAGAGCGGCAAGCCGCAGGCCGAGAGCGGCTTCTCGCTCCAGACCTACAGCTACGTCCAGGCGTTCGCCGAGCTGGTCAAGCGCATGGGTGACGACGTCTCCTACGCGAACTTCCAGAAGACCGCCGAGGGCCTGCAGACCGACCCGATCAAGCTGGGGTCGATCCCGGACATCGAGTGCGGCGCCCTGCCCGACGGGCACACCTGCGCCAAGCAGGCCGGCATCGCGAAGTACACCGGCGGCAAGTGGGTCGTCGAGCAGCAGTTCATGGCTCCGATCTGA
PROTEIN sequence
Length: 403
MMRKPLLIAAAAVTALLAAACGNVSSSSGSGGGETPPGITADQITIGATLPITGTAAVSGQGLQAGIQIAVDEINADGGIGGRKVNAIILDDGYTADRVVTNVRRLVSQEKVYAIVAPAGSQGLPGTWQFLAQNKTPMWGPISPADPKQAEVYLLSATRAAQDSVAIDYFAKKGAKRLAVIQQDNDLGVSAKQALTAQMPKHPDMQIVANETTQAGNTEVSSAVNNVVAAKPDAVLLAEDNTSTALILKQLRAQGFTGMVFADQGAGGTGGTSTVGPAGDAAEGFLGGMQADTVSTDNPAVEHWRDLAKKSGKPQAESGFSLQTYSYVQAFAELVKRMGDDVSYANFQKTAEGLQTDPIKLGSIPDIECGALPDGHTCAKQAGIAKYTGGKWVVEQQFMAPI*