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cn_combo_scaffold_10673_4

Organism: CN-SCN_Pseudonocardia_86x

partial RP 15 / 55 MC: 1 BSCG 14 / 51 MC: 2 ASCG 7 / 38 MC: 1
Location: comp(4761..5930)

Top 3 Functional Annotations

Value Algorithm Source
Histone deacetylase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CPW5_PSEUX similarity UNIREF
DB: UNIREF100
  • Identity: 92.5
  • Coverage: 389.0
  • Bit_score: 752
  • Evalue 1.70e-214
histone deacetylase similarity KEGG
DB: KEGG
  • Identity: 92.5
  • Coverage: 389.0
  • Bit_score: 752
  • Evalue 4.80e-215
Histone deacetylase {ECO:0000313|EMBL:AEA26148.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain similarity UNIPROT
DB: UniProtKB
  • Identity: 92.5
  • Coverage: 389.0
  • Bit_score: 752
  • Evalue 2.40e-214

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Taxonomy

Pseudonocardia dioxanivorans → Pseudonocardia → Pseudonocardiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1170
ATGAGCGCCAGCAGCGCGGCAGTCGTGTGGACCCCGGGGTTCCTCGACTACCAACTCTCCGAGGACCATCCGCTCAATCCCGTCCGTCTCGACCTCACGATGCGCCTCGCGCGCGGCCTCGGAGTGCTCGACGACGTGGAGCTCCTGGAGCCGGAACCGGCCACCGACGAGGAGCTCGAACGCGTGCACTCCTCGTCCTACCTGACCGCGGTGCGCTCGGCGCCCGAGCTGCCCTTCGGGGTCGGTCACGGGCTCGGGACCAGCGACAACCCGGTGTTCTTCGGCATGCACGAGTCGAGCGCGCTCATCGCGGGCGGCTCGTTGCTCGCGGCGCGCCGCATCGCCGAGGGGGCCGACCGGGCCGTCAACATCGCGGGCGGGCTGCACCACGCCATGCGTGACCGGGCGGCGGGGTTCTGCGTCTACAACGACTGTGCCGTCGCGATCCAGTGGCTGCTCGACCAGGGCTACGAGCGGATCGCCTACGTCGACGTCGACGTCCACCACGGCGACGGCGTCCAGGCGGCGTTCTACGACGACCCGCGTGTGCTCACGGTGTCGATGCACCAGCACCCGCTGACGCTGTGGCCCGGCACGGGCTGGGCGAGCGAGACCGGCACCGGCGACGGCACCGGGTACGCGGTCAACGTGCCGCTGGCCCCCGGCACGGGCGACGCGGGCTGGCTGCGGGCGTTCGAGGCGGTCGTGCCGTCACTGTTGGCCTCGTTCCAGCCGCAGGTGCTCGTCAGCGAGTGCGGCGCCGACACCCACTCCGACGACCCGCTGGCCAACCTCGAGCTGTCGGTCGACGGGCAGCGGGCGATCTACCGCCGGATGCGTGAGCTCGCCGACACGACCGCGGGCGGCAAGTGGCTCGTCCTGGGCGGCGGTGGGTACTCGCTGTTCCGCGTCGTCCCGCGGTCGTGGACGCACCTGCTCGGGGTCGTGCTCGACCGCGACGTCGAGCCGAGCCGGCCGCTGCCCGCCGACTGGATCGCCCACGCCACGACGCTGACCGGCCGGCCGTTGCCCACCGACATGACCGACGGCGCCGACCCGTCGTTCGAGCCGTGGGGTGGCGACTTCGCCGCGGTCGACCCGACGATCGTCGAGGTCCGCCGCGCGGTGTTCCCGCTGCACGGCCTCGACCCGGACGACCCCCGTGACTGA
PROTEIN sequence
Length: 390
MSASSAAVVWTPGFLDYQLSEDHPLNPVRLDLTMRLARGLGVLDDVELLEPEPATDEELERVHSSSYLTAVRSAPELPFGVGHGLGTSDNPVFFGMHESSALIAGGSLLAARRIAEGADRAVNIAGGLHHAMRDRAAGFCVYNDCAVAIQWLLDQGYERIAYVDVDVHHGDGVQAAFYDDPRVLTVSMHQHPLTLWPGTGWASETGTGDGTGYAVNVPLAPGTGDAGWLRAFEAVVPSLLASFQPQVLVSECGADTHSDDPLANLELSVDGQRAIYRRMRELADTTAGGKWLVLGGGGYSLFRVVPRSWTHLLGVVLDRDVEPSRPLPADWIAHATTLTGRPLPTDMTDGADPSFEPWGGDFAAVDPTIVEVRRAVFPLHGLDPDDPRD*