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cn_combo_scaffold_11173_3

Organism: CN-SCN_Pseudonocardia_86x

partial RP 15 / 55 MC: 1 BSCG 14 / 51 MC: 2 ASCG 7 / 38 MC: 1
Location: 2182..5457

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, winged helix family n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CSC7_PSEUX similarity UNIREF
DB: UNIREF100
  • Identity: 77.2
  • Coverage: 999.99
  • Bit_score: 1572
  • Evalue 0.0
winged helix family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 77.2
  • Coverage: 999.99
  • Bit_score: 1572
  • Evalue 0.0
Transcriptional regulator, winged helix family {ECO:0000313|EMBL:AEA23101.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonoc similarity UNIPROT
DB: UniProtKB
  • Identity: 77.2
  • Coverage: 999.99
  • Bit_score: 1572
  • Evalue 0.0

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Taxonomy

Pseudonocardia dioxanivorans → Pseudonocardia → Pseudonocardiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 3276
GTGAGCGGTAGTAGTCGCTATAGCGACTATTACCGCGCACAGGTCATTTCGCCCTGTCGGCAAGGGTATTCGCTGCGGCCGCCCGGCGCGGCACGGCAGACTGACGCAGTGCGGATCGGGGTGCTGGGGAGCGTGGCGGCATGGCCGTCGGCGAACGGCGTCCCCGGCAGCGACGCCGCGCCGCCCGGTCTGCGGCTGCGCGGGCTGCTGGCCCGCCTCGCGCTCGACGCCGGCCGTCCGGTCACCACCGAGGCGCTCGTCGACGACCTGTGGGGCGAGGAGCCGCCGGACGCGGTGGGCAACGCGTTGCAGTCGCTGGTGTCGCGGCTGCGGCGGGCGCTGGGTGCGCAGCTGGTCGTGACTGTCCAGGGCGGCTACCTGCTCCACCTCGACCCGGACGCCGTCGACGCCGTGCGGTTCGGCCGGCTCGTCGCGACCGCGAAGGCGGGCGACGACCCCGTGGTCGCGGCCTCCACGTTGGAGGAGGCGCTCGAGCTGTGGCGCGGGCCCGCCCTGGCCGACGTGCGCCGGCTCCCGTTCGCCGACGCCGCCGCGGCGCGGCTGGAGGAGCAGCGGGCGGTGGCCGTCGAGACGCGGGCGGCTTTGGGCCGGGCCGCGGGCGACCCCGGCGCCGGGCTGGACGCGCTGAGCGATCTCCTTGCGGCGCAGCCGTTGCGGGAGAGCGCCGCGGTGGAGCTGGCGCGTGGGCTGCACGCGACGGGACGGCAGGCCGACGCGCTCGCCGTCCTCGACCGGACGCGGGAGCGGCTGGCGGGCGAGCTGGGTGTGGACCCGGGGCCGGAGCTGGCGCGGGCGCGTCTCGACGTGCTGCGCGGCACCCCCGCCACCCCCGTGCGGGGAGAACCGGAACCGTTGCGCCGCAACGGCCTTGCATCGATGACGAGCTTCGTCGGCCGTGACGGCGACGTCGGGCGGGTGCGCAGCCTGCTCGGCACCGCCCGGCTGGTGACGCTCCTCGGCCCGGGCGGGGCGGGCAAGACACGCCTGGCCCGCGAGATCGTCGCCGGGCTCGACGGACGCACCGAGGCACCCGTGGCCGAGCTCGCGCCGCTGACCGGGCCCGACCAGCTCACCGGAACGGTGCTGGCGGCGGTCGGGGAGCCGGAGCTGTTGGTGCGCAACCGCGACGACACCCCACCGGACACGACGATGCGGCTGCTCACCGCCCTGGGCGACCGTGACGTGGTGCTCGTCCTGGACAACTGCGAGCACCTCGTCGACGACGTCGCCGTCCTCACCCAGAAGATGCTGGAGGCGGCGCCGCGGCTACGGGTGCTCGCGACGAGCCGGGAACCGCTGGGCGTCCCGGGTGAGGTGCTGCATCCCGTCGAGCCGCTGCCGGTGGCCGATGCGGTCCGGCTGTTCGCCGACCGTGCCGCGGCGGTGGCGCGGGGGCTCGTCCTCGACGACACGACCGAGCCGGTCGTCACCGAGATCTGTGAACGTCTCGACGGGCAGCCGCTCCCGCTGGAGCTGGCCGCCGCGCGGCTGCGGACGTTGTCGCTCACCGAGATCGCGTCGCGGCTCGACGACCGGTTCCGGCTGCTGACGTCGGGGTCACGCACGGCGCTGCCGCGGCACCAGACGTTGCGCGCGGTGGTCGACTGGAGCTGGGACCTGCTCGGCGAGCCCGAGCGGATCCTGTTGCGCCGCATGGGCGTTTTTGCCGACGGCGCGACGGCGGCGACGGTCGAGCGGGTGTGCGGTGGTGACGGTGGCCCGGAACCGGCCGACGTGTTCGACCTGCTCGCGGCGCTCGTCGACAAGTCGCTGGTCGTGGCCGTGCCCTCGGGCGGAGTCGCGCCGACGCGGTACCGGCTGCTGGAGACCATCCGCGACTACGCCGCCGAGCGGCTCGCGGAGGCCGGCGAGCAGGACGCGGTCGTCGCGGCGCACGCGAGCTGGATCATCGGGCTGGCCGAGGAGGCGGAACCCCACCTGCGGGGCGCCGATCAGCTCCGCTGGATCGGGCAGCTGCGGGCGGAGAACGGCAACATCGCCGTGGCGTTGCGGCGGGCCGCGGCGCGACGTGACGGCGCGACGGCGCACCGGATCGTCGCCGCCATGGGCTGGTCGTGGTTCATCCGCGGCCGCTACGAGGAGTCGGTCACGTGGGTGGAGCAGGTCGGTGCGCTGCCGCCTCCCGACATCCCGTCCGTCGCAGCGCGCACCCTCGCCTACCAGGTGCTGGGCTGCATCGCGCGCGGCGCGGTCGAGGAGGCCGTCGGCCGGTTGGACGAGGCGATCGCCGCCGCGGCGGCCGCACCCGAGCCGCGCCATCCGGCGTTGCAGCTCATCGCCCCGCTCGGGCGGGCGTTCGGCGGCGACTCGACGCTGCTCGACGAGACCGCGCGCAGCTCCGACGATCCGTGGGTCCGTGCCTTCGCCACGCAGGTCAGGGCCCAGCTGGCGGAGAACGAGGGCGACATCGAGCTGCAGCGCGTCCTCGTCCGTGAGGCGCACCAGCTGTTCACCGCGACCGGCGACAGGTTCGGTCTCGGGATGACGCTCGGCTCGCTCGGTGAGCTGGAGGACCTGGCGGGCAACCCCGGCGCCGCCGCGGCTGCCTACGAGGAGGCCGTCGCGTTGGCCACCGAACTGGGCAACGACGACGACCTGCCGCAGTTCATGCTGCAGGAGGCCCGTCTCGCCATCCGGCGCGGCGACCTCGACCGGGCCCGTGAGCTGTGCGAGAACGCCGCCGACATCGCGGCCGGCCCGTTCGGTGTGCAGACGATGGTGCGCTCCACGCTCGCCGAGATCGAGTGCCGGACGGGCAACATCCCGGCAGCGCGGCGACACCTCGCGGCGGCCGCGCGCGACCTGGGCCATGGCATCGCCCGCGAGCAGCGGCAGGCGGCCGTCGCGATGGTGCGCCACCGCATCGAGCTGGCCGGCGGTGACCGCGAGGCCGCGGTGGCAGCCCTGCTGGAGGCGGTCGGGGCGGCGATCGACTCCCACGACGGGCCTGTCGCCGCGATGGTGGTGGAGGTCGCCGCCGGGTTCGTCCTGGCGAGCGGCGACGCCGACGGCGCCGGGTTCCTGCTGGGGGTGGCGACGGCGCAGCGCGGCACGCTCGACCACGGCAATCCCGAGGTCGTCGCGACCGTGGAGGGTGTGAACAATGCCCTCGGCCCCGCCGCGGCCGCCGAAGCGGTGCAGCGGGGCCGGGACCTCCCCCGTCCCGAGGGCCTCGCGACCGTCCGGGACCATGTCCGGGCTCCGATCCGGGAGGATCAGGCCCGCTTGCGGTAG
PROTEIN sequence
Length: 1092
VSGSSRYSDYYRAQVISPCRQGYSLRPPGAARQTDAVRIGVLGSVAAWPSANGVPGSDAAPPGLRLRGLLARLALDAGRPVTTEALVDDLWGEEPPDAVGNALQSLVSRLRRALGAQLVVTVQGGYLLHLDPDAVDAVRFGRLVATAKAGDDPVVAASTLEEALELWRGPALADVRRLPFADAAAARLEEQRAVAVETRAALGRAAGDPGAGLDALSDLLAAQPLRESAAVELARGLHATGRQADALAVLDRTRERLAGELGVDPGPELARARLDVLRGTPATPVRGEPEPLRRNGLASMTSFVGRDGDVGRVRSLLGTARLVTLLGPGGAGKTRLAREIVAGLDGRTEAPVAELAPLTGPDQLTGTVLAAVGEPELLVRNRDDTPPDTTMRLLTALGDRDVVLVLDNCEHLVDDVAVLTQKMLEAAPRLRVLATSREPLGVPGEVLHPVEPLPVADAVRLFADRAAAVARGLVLDDTTEPVVTEICERLDGQPLPLELAAARLRTLSLTEIASRLDDRFRLLTSGSRTALPRHQTLRAVVDWSWDLLGEPERILLRRMGVFADGATAATVERVCGGDGGPEPADVFDLLAALVDKSLVVAVPSGGVAPTRYRLLETIRDYAAERLAEAGEQDAVVAAHASWIIGLAEEAEPHLRGADQLRWIGQLRAENGNIAVALRRAAARRDGATAHRIVAAMGWSWFIRGRYEESVTWVEQVGALPPPDIPSVAARTLAYQVLGCIARGAVEEAVGRLDEAIAAAAAAPEPRHPALQLIAPLGRAFGGDSTLLDETARSSDDPWVRAFATQVRAQLAENEGDIELQRVLVREAHQLFTATGDRFGLGMTLGSLGELEDLAGNPGAAAAAYEEAVALATELGNDDDLPQFMLQEARLAIRRGDLDRARELCENAADIAAGPFGVQTMVRSTLAEIECRTGNIPAARRHLAAAARDLGHGIAREQRQAAVAMVRHRIELAGGDREAAVAALLEAVGAAIDSHDGPVAAMVVEVAAGFVLASGDADGAGFLLGVATAQRGTLDHGNPEVVATVEGVNNALGPAAAAEAVQRGRDLPRPEGLATVRDHVRAPIREDQARLR*