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cn_combo_scaffold_11410_3

Organism: CN-SCN_Pseudonocardia_86x

partial RP 15 / 55 MC: 1 BSCG 14 / 51 MC: 2 ASCG 7 / 38 MC: 1
Location: 963..1862

Top 3 Functional Annotations

Value Algorithm Source
Polar amino acid ABC transporter, inner membrane subunit n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CPU6_PSEUX similarity UNIREF
DB: UNIREF100
  • Identity: 86.9
  • Coverage: 298.0
  • Bit_score: 506
  • Evalue 1.60e-140
polar amino acid ABC transporter permease similarity KEGG
DB: KEGG
  • Identity: 86.6
  • Coverage: 298.0
  • Bit_score: 505
  • Evalue 1.30e-140
  • rbh
Polar amino acid ABC transporter, inner membrane subunit {ECO:0000313|EMBL:AEA26129.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source= similarity UNIPROT
DB: UniProtKB
  • Identity: 86.6
  • Coverage: 298.0
  • Bit_score: 505
  • Evalue 6.70e-140

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Taxonomy

Pseudonocardia dioxanivorans → Pseudonocardia → Pseudonocardiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 900
GTGACCTCGGTCCTCTACGACGTCCCGGGACCGCGCGCGAAGGTCCGCAACGGGCTCATCGGTGTCGTCGGCACGGTCGTCGTGCTCGGCATCCTCGCGTTCGTCGTGTACCGGCTCGCGGCCACCGGCCAGTTCGAGCCGCGGCTGTGGGAATGGATCCAGTTCAAGGCGATCCAGGTCCTGCTCGTCGAAGCCCTGCTGAACACGCTCAGCGCGTTCGCGGCAGCCGCCGTGCTGTCGCTGGCGTTCGGCGCGCTGTTCGCCGCCGGCCGGCTCTCCGAACACGCCTGGCTGCGCGGCCCCTCGACGGCGATCGTCGAGTTCTTCCGCGCGGTCCCACTGCTGATCCTGATCTTCATCCTGTACTTCGGCGTCTCGCAGACCCTCGGTCTGAACCTGTCGACGTACTGGTCGCTGGTGCTCGGCCTGATGCTCTACAACGGCTCCGTGCTCGCGGAGATCTTCCGGGCCGGTGTGCGGGCGCTGCCCCGCGGCCAGAGCGAGGCCGCCTACGCGCTCGGGATGCGCAAGACCCAGGTCATGACGAATGTCCTGCTGCCGCAGTCGCTGCGGGCGATGCTGCCGACGATCGTCAGCCAGCTGGTCGTCGTCCTCAAGGACACCGCGCTGGGCTTCATCATCCTGTACCCCGAACTGCTGTATCAGGCGCGCTTCCTGGGCAGCCAGGGTCAGCTGGGCGCCCCGATCCTGCAGGTCGCCATGGTCATCGCGGTCATCTACATCATCCTGTGCCTGATCCTCTCGGGCATCGCGCAGCTCCTCGAGCGGCGGAGCCGCCGTTCCCCGCGGGGTGGCGACATCGACCCGAACGAGAAGGCCCGCGCCGAGGGTGGGGTCGCCGCCGCTCAGGCCCAGGGCGGCGGCGGCGCGGTGATCTGA
PROTEIN sequence
Length: 300
VTSVLYDVPGPRAKVRNGLIGVVGTVVVLGILAFVVYRLAATGQFEPRLWEWIQFKAIQVLLVEALLNTLSAFAAAAVLSLAFGALFAAGRLSEHAWLRGPSTAIVEFFRAVPLLILIFILYFGVSQTLGLNLSTYWSLVLGLMLYNGSVLAEIFRAGVRALPRGQSEAAYALGMRKTQVMTNVLLPQSLRAMLPTIVSQLVVVLKDTALGFIILYPELLYQARFLGSQGQLGAPILQVAMVIAVIYIILCLILSGIAQLLERRSRRSPRGGDIDPNEKARAEGGVAAAQAQGGGGAVI*