ggKbase home page

cn_combo_scaffold_11428_1

Organism: CN-SCN_Pseudonocardia_86x

partial RP 15 / 55 MC: 1 BSCG 14 / 51 MC: 2 ASCG 7 / 38 MC: 1
Location: comp(1..630)

Top 3 Functional Annotations

Value Algorithm Source
MscS Mechanosensitive ion channel n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4D1N4_PSEUX similarity UNIREF
DB: UNIREF100
  • Identity: 85.9
  • Coverage: 205.0
  • Bit_score: 357
  • Evalue 8.60e-96
mechanosensitive ion channel MscS similarity KEGG
DB: KEGG
  • Identity: 85.9
  • Coverage: 205.0
  • Bit_score: 357
  • Evalue 2.40e-96
MscS Mechanosensitive ion channel {ECO:0000313|EMBL:AEA26946.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxani similarity UNIPROT
DB: UniProtKB
  • Identity: 85.9
  • Coverage: 205.0
  • Bit_score: 357
  • Evalue 1.20e-95

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Pseudonocardia dioxanivorans → Pseudonocardia → Pseudonocardiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 630
GTGACCGATCCCCTCCAGGGCCTGTTGCCCGACCAGCCCGTCTGCGCCGCCGAGCCCGGCACCTGGTGCGCCCGCTTCTACGAGTGGACGCACAGCGACTTCCTCGCCGAGTCGGCCAACACGATCGTCTCCAAGACGTTGGCGATCGTGCTGATCATCGTCGTGGCACTGGTGACACGGTGGCTGCTGCACCGCGCGATCCGCCGGCTCATCGAGAACGCCGCCGACAACCGCGTCTCCCGCGCCATCGTGCGCCGGACCCCCAACCGGCTGCGCAACGGCTCCGTCGAGGCCGTGACCGCGCGGCGCTCGCAGCGGGCCAAGACCATCGGCTCGGTGCTGCGCTCGATCAGCTCCGCCGTCATCCTGCTGATCGCCGCCGTCATGATCCTCGCCGAGTTCGGGGTGAACCTCGGCCCGATCCTCGCCTCCGCCGGCATCGTCGGCATCGCCGTCGGCTTCGGCGCGCAGAACCTCGTCCGCGACTTCCTGTCCGGCATGTTCATGCTGCTCGAGGACCAGTACGGGGTCGGCGACGTCGTCGACGTCGGTGACGCCGTCGGCACCGTCGAGACCGTCGGGCTGCGCATCACGACGATCCGCGACATCAAGGGCACCCTCTGGTACGTC
PROTEIN sequence
Length: 210
VTDPLQGLLPDQPVCAAEPGTWCARFYEWTHSDFLAESANTIVSKTLAIVLIIVVALVTRWLLHRAIRRLIENAADNRVSRAIVRRTPNRLRNGSVEAVTARRSQRAKTIGSVLRSISSAVILLIAAVMILAEFGVNLGPILASAGIVGIAVGFGAQNLVRDFLSGMFMLLEDQYGVGDVVDVGDAVGTVETVGLRITTIRDIKGTLWYV