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cn_combo_scaffold_11725_10

Organism: CN-SCN_Pseudonocardia_86x

partial RP 15 / 55 MC: 1 BSCG 14 / 51 MC: 2 ASCG 7 / 38 MC: 1
Location: 7727..8353

Top 3 Functional Annotations

Value Algorithm Source
Pseudouridine synthase {ECO:0000256|RuleBase:RU003887}; EC=5.4.99.- {ECO:0000256|RuleBase:RU003887};; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocar similarity UNIPROT
DB: UniProtKB
  • Identity: 93.3
  • Coverage: 208.0
  • Bit_score: 391
  • Evalue 5.70e-106
Pseudouridine synthase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CLD5_PSEUX similarity UNIREF
DB: UNIREF100
  • Identity: 93.3
  • Coverage: 208.0
  • Bit_score: 391
  • Evalue 4.10e-106
pseudouridine synthase similarity KEGG
DB: KEGG
  • Identity: 93.3
  • Coverage: 208.0
  • Bit_score: 391
  • Evalue 1.20e-106

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Taxonomy

Pseudonocardia dioxanivorans → Pseudonocardia → Pseudonocardiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 627
ATGGGCCGCCGCGTCGACCCCGACACCGCTGTCGTGCACGTCGACGGCGCGCGGGTCGTGCTGCGCGACGACCTCGTGTACCTCGCCCTGAACAAGCCGCGCGGCATGCTGTCGACGATGTCGGACGACCGGGGCCGCGAGTGCGTCGGCGACCTGATCGCCGACCGCGCCGAGCTGCTCAACCAGGCCGGCCGGCTCTTCCACGTCGGTCGTCTCGACGCCGAGACCGAGGGCCTGCTGCTGCTCACCAACGACGGCGAGCTGGGTCACCGGCTCATGCACCCGTCGTTCGAGGTCGAGAAGACCTACGTCGCGGAGGTCGCGGGCCAGGTCGCGCGCGACCTCGGCAAGCGGATGAGAGCCGGTGTCGAGCTCGAGGACGGGCCCGTCGACGTGCACTCGTTCAAGCTCGTCGACTGGTCCGGCGGGCGGTCGATGGTCGAGATCGTGCTGCACGAGGGCCGCAAGCACGTCGTGCGCCGGCTGATGGACGAGGTGGGCTACCCCGTGCTCCGCCTGGTGCGCACCGGCATCGGCGACGTCCGCCTCGGTGAGCAACGGCCGGGCAAGCTGCGCCCGCTCAACCAGTCCGAGGTGGGTGCGCTCTACCGCGCCGTGGGTCTCTGA
PROTEIN sequence
Length: 209
MGRRVDPDTAVVHVDGARVVLRDDLVYLALNKPRGMLSTMSDDRGRECVGDLIADRAELLNQAGRLFHVGRLDAETEGLLLLTNDGELGHRLMHPSFEVEKTYVAEVAGQVARDLGKRMRAGVELEDGPVDVHSFKLVDWSGGRSMVEIVLHEGRKHVVRRLMDEVGYPVLRLVRTGIGDVRLGEQRPGKLRPLNQSEVGALYRAVGL*