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cn_combo_scaffold_11896_5

Organism: CN-SCN_Pseudonocardia_86x

partial RP 15 / 55 MC: 1 BSCG 14 / 51 MC: 2 ASCG 7 / 38 MC: 1
Location: comp(4366..5355)

Top 3 Functional Annotations

Value Algorithm Source
LysR family transcriptional regulator n=1 Tax=Pseudonocardia sp. P1 RepID=UPI0001FFF17B similarity UNIREF
DB: UNIREF100
  • Identity: 72.8
  • Coverage: 331.0
  • Bit_score: 463
  • Evalue 2.30e-127
Transcriptional regulator {ECO:0000313|EMBL:EHR50619.1}; TaxID=882083 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharomonospora.;" source="Saccharomonospora marina XM similarity UNIPROT
DB: UniProtKB
  • Identity: 75.6
  • Coverage: 299.0
  • Bit_score: 429
  • Evalue 5.10e-117
transcriptional regulator, LysR family protein similarity KEGG
DB: KEGG
  • Identity: 72.7
  • Coverage: 308.0
  • Bit_score: 428
  • Evalue 1.80e-117

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Taxonomy

Saccharomonospora marina → Saccharomonospora → Pseudonocardiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 990
TCGGTAGCCAGCTGCGGCAGCGTGGGGAAGGCAGCGCAGGCCCACAGTCTCTCCCAGCCGGCCGCCAGCACCCGGATCAGCGCGATGGAGCGGAGGCTTGGCCTCCGTCTGCTGGAACGCTCCGCCACCGGTTCGAAGCTCACCGAGGAAGGGGAGATGCTGGCCAAGTACGCCCGCAACGTGATGCAGGCGGCACGAGAGCTGCTGGAGTTCGGGTCCCGTGCCCGGTCCTCCGAGGCTAAACGGATTCGCGTCGCGGGAACGCCTGCGATTGCCGAGCATCTGATCCCCGAGTGGTTGAACCGCTCCGGATTCTCGTTCGGCGAGGCGAGGGTCGAGGTGCAGACCGGTGGCATCGACGAGCTCCGGCAGCTGATCCTCTCGGGCGATGTCGATCTCGCATTCATCGACGGGTGGGGCCAAGCGGGTCGCAAGGGGTGGTGGCAGCAAGATCGCGACGACGTGGTGACCCGCTACATCTGTGACGATCAGCTTGCGGTCGTGGTCGGTGCGATGCACCCGTGGGCAGCACGGACCACGCCCTTGACGGTGTCGGAGCTCGCAGCCGGCCCCCTGGTTCTACGCGAGCGCGGGTCCGGGCTGCGAGAGTTCACGGACGGACTGCTGGAGGCAGCGGGAGCCCCGCAGACATATGTCGAGCTCCCGTCCACCGGCGCGATCAAGCAGGCGGTCGCCACCAGCCAGCGAGTGACGGTCCTCAATGTCTCCACCGTGCGGGCCGAGCTCGAAGACGGGCGGCTTCATCTAGTTGCCGTCGACCGGGAGATGCCCTTCAAGCCGATCTACGCGGCATGGAGTGAGCAACGAGGCCTCCCGGAGCACGCGGTGAATCTGGTGGAGGTCGCTGCGTCCAGAGTCTCCTCCAAACCTGCACTCGAGTCGATTCACAAGCCGCGACAGGTCAATTCACGCATTCGAACGCGACCGCAAGATTCCTTAGCGGTCGACGCCCACGAGGCGATCGCTTGA
PROTEIN sequence
Length: 330
SVASCGSVGKAAQAHSLSQPAASTRISAMERRLGLRLLERSATGSKLTEEGEMLAKYARNVMQAARELLEFGSRARSSEAKRIRVAGTPAIAEHLIPEWLNRSGFSFGEARVEVQTGGIDELRQLILSGDVDLAFIDGWGQAGRKGWWQQDRDDVVTRYICDDQLAVVVGAMHPWAARTTPLTVSELAAGPLVLRERGSGLREFTDGLLEAAGAPQTYVELPSTGAIKQAVATSQRVTVLNVSTVRAELEDGRLHLVAVDREMPFKPIYAAWSEQRGLPEHAVNLVEVAASRVSSKPALESIHKPRQVNSRIRTRPQDSLAVDAHEAIA*