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cn_combo_scaffold_12317_4

Organism: CN-SCN_Pseudonocardia_86x

partial RP 15 / 55 MC: 1 BSCG 14 / 51 MC: 2 ASCG 7 / 38 MC: 1
Location: comp(2770..3429)

Top 3 Functional Annotations

Value Algorithm Source
two-component system response regulator n=1 Tax=Pseudonocardia sp. P1 RepID=UPI0001FFDC55 similarity UNIREF
DB: UNIREF100
  • Identity: 68.2
  • Coverage: 217.0
  • Bit_score: 274
  • Evalue 1.00e-70
Two-component system response regulator {ECO:0000313|EMBL:EOD70531.1}; TaxID=1292037 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis va similarity UNIPROT
DB: UniProtKB
  • Identity: 55.3
  • Coverage: 219.0
  • Bit_score: 221
  • Evalue 1.10e-54
two-component system response regulator similarity KEGG
DB: KEGG
  • Identity: 55.3
  • Coverage: 219.0
  • Bit_score: 220
  • Evalue 3.70e-55

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Taxonomy

Amycolatopsis vancoresmycina → Amycolatopsis → Pseudonocardiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 660
GTGCGGGCACTGCTCGTCGAGGACGACGAGGTCGCCGGGGACGCCCTGCGGCGGGCCCTCGTCGGCGCGGGCTTCCGCGTCCGGCACGTGACCAGCGGCGCCGAGGCGCTGTCGGCCGTCGGTGACGACGAGCCCGACGTCGTCCTGCTCGACATGGGCCTGCCCGACCGCGACGGCCTCGGCGTCTGCCGCGGCATCCGCGAGGTGTCCCGGGTGCCGATCATCGCCGTCACCGGCCGGGGTGCGGTCGAGGCCCGGGTCAGCGGGCTGCGCAGCGGCGCCGACGACTACATCGTGAAGCCCTTCCTGCTCGAGGAGCTGTTGGCGCGCATCGACGCCGTGCTGCGCCGCAGCCGCGGCCTCGGGGTTGCGCCCGCGGTCCGGGCGGGCGACGTCGAGATCGACCTCGCGCGCCGCGAGGTGCTCGTCGACGGCGAGTCGGTGGCGTTGGCGCGCAAGGAGTTCGACCTCCTCGCCGCGCTCGCCCGGCGGGAGGGTGCCGTCGTCGACAGGGCCGCGCTCGTCGACGAGGTGTGGGGCGGGCCCGGTCCCGGCCTGGAACGCACGCTGGAGGCGCACGTCGCGACGTTGCGCGCCAAGCTCGGCCGCCCCGACGCGGTGCGGACCGTGCGTGGGGTGGGGTACCGGCTCGACGTCTGA
PROTEIN sequence
Length: 220
VRALLVEDDEVAGDALRRALVGAGFRVRHVTSGAEALSAVGDDEPDVVLLDMGLPDRDGLGVCRGIREVSRVPIIAVTGRGAVEARVSGLRSGADDYIVKPFLLEELLARIDAVLRRSRGLGVAPAVRAGDVEIDLARREVLVDGESVALARKEFDLLAALARREGAVVDRAALVDEVWGGPGPGLERTLEAHVATLRAKLGRPDAVRTVRGVGYRLDV*