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cn_combo_scaffold_12317_5

Organism: CN-SCN_Pseudonocardia_86x

partial RP 15 / 55 MC: 1 BSCG 14 / 51 MC: 2 ASCG 7 / 38 MC: 1
Location: 3561..5012

Top 3 Functional Annotations

Value Algorithm Source
sodium:dicarboxylate symporter n=1 Tax=Pseudonocardia sp. P1 RepID=UPI0001FFDC56 similarity UNIREF
DB: UNIREF100
  • Identity: 71.2
  • Coverage: 472.0
  • Bit_score: 651
  • Evalue 6.60e-184
C4-dicarboxylate transport protein {ECO:0000313|EMBL:GAF42707.1}; TaxID=1219028 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus wratislaviensis N similarity UNIPROT
DB: UniProtKB
  • Identity: 59.9
  • Coverage: 451.0
  • Bit_score: 547
  • Evalue 2.50e-152
sodium:dicarboxylate symporter similarity KEGG
DB: KEGG
  • Identity: 51.3
  • Coverage: 491.0
  • Bit_score: 473
  • Evalue 9.10e-131
  • rbh

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Taxonomy

Rhodococcus wratislaviensis → Rhodococcus → Corynebacteriales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1452
ATGACCGAAGTCGCGGCAGAGACAGCACCACCGCGCAGGCGTTTCTGGACACAGCTGTGGTTCTGGGTGATCGTGGGCATCGCCGCGGGGATCCTCCTCGGCATCGTCGCGCCCGCCGCGGCGAAGGAGACCAAGTGGCTGGCCGACGCGTTCATCCAGCTCATCAAGGTGATCGTCGGACCGGTCATCTTCTGCACGGTGATCGTGGGCATCGCGTCGCTGGGCAACCTGGCCCGTGCCGGCGGGCTCGCGCTGCGGGCGCTGGGCTACTTCCTGCTGGCGACGATCGTCGCGCTCACGCTCGGCCTGATCGCGGCGAACGTCGTGAAGCCGGGTGTGGGGTTCACCGGTGAGCCCACGCAGGCCCAGCTCGACCAGGCCGCCGGCCAGATCCAGCAGGGCAAGACCGACTCCGGGTTCATCGCGTTCCTGACCAACGACCTGCTGCCCAAGAGCTTCCTGGGCCCGTTCGTCGACAACAAGGTCCTGCAGGTCCTGGTGCTGGCGATCCTGACGGCGTGCGCGATCAGCGCGCTGGCCGCACCGCTGCGCAAGCGGCTCGTCGGCGGCGTCGAGGCGCTGTCGAAGGTGATCTTCGGCATCATCAAGCTGATCATGTGGCTGGCCCCGCTGGCCGCGTTCGGCGGCATGGCCTACACGGTCGCCATGTTCGGGTCGGCGTCGCTGAAGAACCTCGGCGTCCTGATGCTGACGTTCTGGATCACGTGCGCGATCTTCGTGTTCGTCGTGCTCGGCGCGGTGTCGGCATGGGCCGGGTTCTCGATCCTCAAGGTCATCCGGCTCATCAAGGACGAGCTGCTGATCATCCTCGGCACCTCGTCGTCGGAGTCGGTGCTGCCCCGGCTGCTCACCAAGCTGGAGTCGGCCGGTGCGTCGCGCCAGACCGTCGGCCTGGTCATCCCGACCGGCTACTCGTTCAACCTCGACGGCACCTGCATCTACCTCACGCTGGGTGCGTTGTTCATCATCCAGGCGGGCAACGAGTCCCTGCCGATCGGCGCGCAGATCGGGCTCGCGCTACTCATGGTGCTGACGTCCAAGGGCGCAGCCGGCATCACCGGCGCCGGCCTCGTGACGCTGGCGGCGTCCCTGCAGGCGTTCGGCGGGGAGTTCTTCACCCCCGAGGCCATCGCGATCGGCATCGCCGTCATCATCGGCATCGACCGCGTCATGAGCGAGGGCCGCGCCGTCACCAACTGCATCGGCAACGTGGTGGCGACGCTCGTCATCGCCCGCTGGCAGAACGAGCTCGACCGCGACCGGCTGCGGGCCGTGCTCGACGACCCGTCGCTCGTCGCCGCGGACATGGAGTACCACCACGGCGGCGGCGCCCGGGACGAGTCCGACGACGAGGTCACGCTCGAGAAGGACGCCGGGAAGGACACCGCCGACGGCGGGGACATGGCGGCGGTGGGCAGCGGGACACGCTGA
PROTEIN sequence
Length: 484
MTEVAAETAPPRRRFWTQLWFWVIVGIAAGILLGIVAPAAAKETKWLADAFIQLIKVIVGPVIFCTVIVGIASLGNLARAGGLALRALGYFLLATIVALTLGLIAANVVKPGVGFTGEPTQAQLDQAAGQIQQGKTDSGFIAFLTNDLLPKSFLGPFVDNKVLQVLVLAILTACAISALAAPLRKRLVGGVEALSKVIFGIIKLIMWLAPLAAFGGMAYTVAMFGSASLKNLGVLMLTFWITCAIFVFVVLGAVSAWAGFSILKVIRLIKDELLIILGTSSSESVLPRLLTKLESAGASRQTVGLVIPTGYSFNLDGTCIYLTLGALFIIQAGNESLPIGAQIGLALLMVLTSKGAAGITGAGLVTLAASLQAFGGEFFTPEAIAIGIAVIIGIDRVMSEGRAVTNCIGNVVATLVIARWQNELDRDRLRAVLDDPSLVAADMEYHHGGGARDESDDEVTLEKDAGKDTADGGDMAAVGSGTR*