ggKbase home page

cn_combo_scaffold_12412_12

Organism: CN-SCN_Pseudonocardia_86x

partial RP 15 / 55 MC: 1 BSCG 14 / 51 MC: 2 ASCG 7 / 38 MC: 1
Location: 8207..8698

Top 3 Functional Annotations

Value Algorithm Source
Transcription elongation factor GreA n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CIX4_PSEUX similarity UNIREF
DB: UNIREF100
  • Identity: 94.5
  • Coverage: 163.0
  • Bit_score: 308
  • Evalue 3.60e-81
transcription elongation factor GreA similarity KEGG
DB: KEGG
  • Identity: 94.5
  • Coverage: 163.0
  • Bit_score: 308
  • Evalue 1.00e-81
Transcription elongation factor GreA {ECO:0000256|HAMAP-Rule:MF_00105, ECO:0000256|SAAS:SAAS00003926}; Transcript cleavage factor GreA {ECO:0000256|HAMAP-Rule:MF_00105}; TaxID=675635 species="Bacteria similarity UNIPROT
DB: UniProtKB
  • Identity: 94.5
  • Coverage: 163.0
  • Bit_score: 308
  • Evalue 5.00e-81

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Pseudonocardia dioxanivorans → Pseudonocardia → Pseudonocardiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 492
ATGACCGTGACGGACACCCAGGTGACCTGGTTGACCCAGGACGCTTACGATCGGCTGAAGAGTGAGCTCGACCAGCTGATCGCGAACCGCCCCGTCATCGCCGCCGAGATCAACGCCCGCCGCGAGGAGGGCGACCTCAAGGAGAACGGCGGCTACCACGCCGCGCGCGAGGAGCAGGGTCAGCAGGAGGCGCGCATCCGCCAGCTCCAGGAGCTGCTCCGGACCGCTCAGGTCGGCACCGCGCCCACCAGCACCGATGTCGCCTCCCCCGGCACCGTCCTCACCGTCAAGTACGACGACGACGACACCGAGAAGGTCCTGCTGGGCTCCCGCGAGGAGGGCTCCCACGGCGATCTGCAGGTCATCTCCCCGAACTCCCCGCTCGGTGCGGCGCTGCTCGGAGCGAAGGTCGGCGAGACGCGCGAGTACGCCCTGCCCGACGGCGGCACCATGAAGGTCACGCTGGCCGGCGTGGCGCCGTTCACCGGCTGA
PROTEIN sequence
Length: 164
MTVTDTQVTWLTQDAYDRLKSELDQLIANRPVIAAEINARREEGDLKENGGYHAAREEQGQQEARIRQLQELLRTAQVGTAPTSTDVASPGTVLTVKYDDDDTEKVLLGSREEGSHGDLQVISPNSPLGAALLGAKVGETREYALPDGGTMKVTLAGVAPFTG*